Difference between revisions of "TSS:Hg 110115.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=3209 |entrez_id=8509 |gc_percent=0.572139 |gene_alias=HSST2|NST2 |gene_description=N-deacetylase and N-sulfotransferase 2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NST2= | ||
| + | |all_trans=AK293527:-71 ENST00000299641.8:-103 uc057udx.1:-103 U36601:202 BC110588:205 BC110589:205 KJ892549:228 CU690170:228 AB208870:268 ENST00000465929.1:-448 uc057uea.1:-448 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-71 | ||
|distance_to_tss=3209 | |distance_to_tss=3209 | ||
| + | |end=73808628 | ||
|entrez_id=8509 | |entrez_id=8509 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=HSST2|NST2 | |gene_alias=HSST2|NST2 | ||
|gene_description=N-deacetylase and N-sulfotransferase 2 | |gene_description=N-deacetylase and N-sulfotransferase 2 | ||
| − | |gene_name=NDST2 | + | |gene_id=8509 |
| + | |gene_name=N-deacetylase/N-sulfotransferase 2 | ||
| + | |gene_source=HGNC:7681 | ||
| + | |gene_symbol=NDST2 | ||
| + | |gene_synonyms=HSST2 NST2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7681 | ||
|nearest_ensembl=ENSG00000166507 | |nearest_ensembl=ENSG00000166507 | ||
|nearest_promoter_id=NM_003635 | |nearest_promoter_id=NM_003635 | ||
|nearest_refseq=NM_003635 | |nearest_refseq=NM_003635 | ||
|nearest_unigene=Hs.654758 | |nearest_unigene=Hs.654758 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=73808616 | ||
| + | |strand=- | ||
| + | |transcript_name=AK293527 | ||
| + | |tss_classification=no | ||
|tss_id=hg_110115.1 | |tss_id=hg_110115.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DE98 | ||
}} | }} | ||
Revision as of 00:56, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK293527 |
|---|---|
| Distance: | -71 |
| Num_trans: | 11 |
| All_trans: | AK293527:-71 ENST00000299641.8:-103 uc057udx.1:-103 U36601:202 BC110588:205 BC110589:205 KJ892549:228 CU690170:228 AB208870:268 ENST00000465929.1:-448 uc057uea.1:-448 |
TATA-Box annotation
| Distance to TSS: | 3209 |
|---|---|
| Nearest PromoterID: | NM_003635 |
| Entrez ID: | 8509 |
| Nearest Unigene: | Hs.654758 |
| Nearest Refseq: | NM_003635 |
| Nearest Ensembl: | ENSG00000166507 |
| Gene Name: | N-deacetylase/N-sulfotransferase 2 |
| Gene Alias: | HSST2 |
| Gene Description: | N-deacetylase and N-sulfotransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
