Difference between revisions of "TSS:Hg 110120.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=14 |entrez_id=8509 |gc_percent=0.791045 |gene_alias=HSST2|NST2 |gene_description=N-deacetylase and N-sulfotransferase 2 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NST2= | ||
| + | |all_trans=NM_003635:-5 AK303648:-5 ENST00000398701.2:11 uc057ueb.1:11 BC018681:26 ENST00000603027.5:158 uc057udp.1:158 BC052780:158 ENST00000309979.10:225 uc001jvk.3:225 BC035711:225 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-5 | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
| + | |end=73811826 | ||
|entrez_id=8509 | |entrez_id=8509 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=HSST2|NST2 | |gene_alias=HSST2|NST2 | ||
|gene_description=N-deacetylase and N-sulfotransferase 2 | |gene_description=N-deacetylase and N-sulfotransferase 2 | ||
| − | |gene_name=NDST2 | + | |gene_id=8509 |
| + | |gene_name=N-deacetylase/N-sulfotransferase 2 | ||
| + | |gene_source=HGNC:7681 | ||
| + | |gene_symbol=NDST2 | ||
| + | |gene_synonyms=HSST2 NST2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7681 | ||
|nearest_ensembl=ENSG00000166507 | |nearest_ensembl=ENSG00000166507 | ||
|nearest_promoter_id=NM_003635 | |nearest_promoter_id=NM_003635 | ||
|nearest_refseq=NM_003635 | |nearest_refseq=NM_003635 | ||
|nearest_unigene=Hs.654758 | |nearest_unigene=Hs.654758 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=73811808 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_003635 AK303648 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_110120.1 | |tss_id=hg_110120.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4E139 P52849 | ||
}} | }} | ||
Revision as of 00:56, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_003635 AK303648 |
|---|---|
| Distance: | -5 |
| Num_trans: | 11 |
| All_trans: | NM_003635:-5 AK303648:-5 ENST00000398701.2:11 uc057ueb.1:11 BC018681:26 ENST00000603027.5:158 uc057udp.1:158 BC052780:158 ENST00000309979.10:225 uc001jvk.3:225 BC035711:225 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_003635 |
| Entrez ID: | 8509 |
| Nearest Unigene: | Hs.654758 |
| Nearest Refseq: | NM_003635 |
| Nearest Ensembl: | ENSG00000166507 |
| Gene Name: | N-deacetylase/N-sulfotransferase 2 |
| Gene Alias: | HSST2 |
| Gene Description: | N-deacetylase and N-sulfotransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
