Difference between revisions of "TSS:Hg 111727.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=45826 |entrez_id=2263 |gc_percent=0.512438 |gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |gene_descri...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BEK= | ||
| + | |BFR-1= | ||
| + | |CD332= | ||
| + | |CEK3= | ||
| + | |CFD1= | ||
| + | |ECT1= | ||
| + | |JWS= | ||
| + | |K-SAM= | ||
| + | |KGFR= | ||
| + | |TK14= | ||
| + | |TK25= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance= | ||
|distance_to_tss=45826 | |distance_to_tss=45826 | ||
| + | |end=121485493 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 12: | Line 26: | ||
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=121485482 | ||
| + | |strand=- | ||
|tata_box="30(AACTTTTTAAGC,-,0.00),32(CTTTTTAAGCTG,+,0.00)" | |tata_box="30(AACTTTTTAAGC,-,0.00),32(CTTTTTAAGCTG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_111727.1 | |tss_id=hg_111727.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 02:05, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 45826 |
|---|---|
| Nearest PromoterID: | NM_001320654 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | FGFR2 |
| Gene Alias: | BBDS |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "30(AACTTTTTAAGC,-,0.00),32(CTTTTTAAGCTG,+,0.00)" |
