Difference between revisions of "TSS:Hg 87558.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |RET/PCM-1= | ||
|all_trans=ENST00000518930.1:0 uc064kpk.1:0 ENST00000517545.5:22 ENST00000517730.5:22 uc064kpl.1:22 uc064kpm.1:22 BC098391:22 AK307583:22 ENST00000518537.5:31 uc003wyh.4:31 BC000453:31 ENST00000518936.5:38 uc064kpn.1:38 BC065022:38 ENST00000523055.5:42 uc064kpo.1:42 BC027477:42 ENST00000519253.5:60 uc011kyh.3:60 BC140946:60 ENST00000327578.9:-101 NM_006197:-101 NM_001315507:-101 NM_001315508:-101 uc064kpj.1:-101 L27841:-111 ENST00000325083.12:-118 uc003wyi.5:-118 | |all_trans=ENST00000518930.1:0 uc064kpk.1:0 ENST00000517545.5:22 ENST00000517730.5:22 uc064kpl.1:22 uc064kpm.1:22 BC098391:22 AK307583:22 ENST00000518537.5:31 uc003wyh.4:31 BC000453:31 ENST00000518936.5:38 uc064kpn.1:38 BC065022:38 ENST00000523055.5:42 uc064kpo.1:42 BC027477:42 ENST00000519253.5:60 uc011kyh.3:60 BC140946:60 ENST00000327578.9:-101 NM_006197:-101 NM_001315507:-101 NM_001315508:-101 uc064kpj.1:-101 L27841:-111 ENST00000325083.12:-118 uc003wyi.5:-118 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=106 | |distance_to_tss=106 | ||
|end=17922968 | |end=17922968 | ||
| + | |end_of_center_position=17922963 | ||
|entrez_id=5108 | |entrez_id=5108 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=PTC4 | + | |gene_alias=PTC4 |
|gene_description=pericentriolar material 1 | |gene_description=pericentriolar material 1 | ||
|gene_id=5108 | |gene_id=5108 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=17922957 | |start=17922957 | ||
| + | |start_of_center_position=17922962 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000518930.1 uc064kpk.1 | |transcript_name=ENST00000518930.1 uc064kpk.1 | ||
Revision as of 15:15, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17922962 |
|---|---|
| End of the center position in the TSS region: | 17922963 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000518930.1 uc064kpk.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000518930.1:0 uc064kpk.1:0 ENST00000517545.5:22 ENST00000517730.5:22 uc064kpl.1:22 uc064kpm.1:22 BC098391:22 AK307583:22 ENST00000518537.5:31 uc003wyh.4:31 BC000453:31 ENST00000518936.5:38 uc064kpn.1:38 BC065022:38 ENST00000523055.5:42 uc064kpo.1:42 BC027477:42 ENST00000519253.5:60 uc011kyh.3:60 BC140946:60 ENST00000327578.9:-101 NM_006197:-101 NM_001315507:-101 NM_001315508:-101 uc064kpj.1:-101 L27841:-111 ENST00000325083.12:-118 uc003wyi.5:-118 |
TATA-Box annotation
| Distance to TSS: | 106 |
|---|---|
| Nearest PromoterID: | NM_001315508 |
| Entrez ID: | 5108 |
| Nearest Unigene: | Hs.491148 |
| Nearest Refseq: | NM_006197 |
| Nearest Ensembl: | ENSG00000078674 |
| Gene Name: | pericentriolar material 1 |
| Gene Alias: | PTC4 |
| Gene Description: | pericentriolar material 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
