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Difference between revisions of "TSS:Hg 102.1"

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Line 6: Line 6:
 
|distance_to_tss=-162
 
|distance_to_tss=-162
 
|end=1425969
 
|end=1425969
 +
|end_of_center_position=1425967
 
|entrez_id=643965
 
|entrez_id=643965
 
|gc_percent=0.666667
 
|gc_percent=0.666667
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=1425963
 
|start=1425963
 +
|start_of_center_position=1425966
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000378821.3 NM_001146685 uc010nyp.2
 
|transcript_name=ENST00000378821.3 NM_001146685 uc010nyp.2

Revision as of 15:41, 10 May 2019

Basic information about the TSS


TSS ID:hg_102.1
Species:human
Chr:chr1
TSS Classification:yes
Start:1425963
End:1425969
Strand:+
TSS Score:1
Start of the center position in the TSS region:1425966
End of the center position in the TSS region:1425967



Gene and protein annotation


Transcript_name:ENST00000378821.3 NM_001146685 uc010nyp.2
Distance:159
GeneID:643965
HGNC/MGI_ID:HGNC:37099
UniProt_ID:A6NKF7
Gene_name:transmembrane protein 88B
Gene_symbol:TMEM88B
Gene_synonyms:
Gene_source:HGNC:37099



Transcript annotation


Transcript_name:ENST00000378821.3 NM_001146685 uc010nyp.2
Distance:159
Num_trans:3
All_trans:ENST00000378821.3:159 NM_001146685:159 uc010nyp.2:159



TATA-Box annotation


Distance to TSS:-162
Nearest PromoterID:NM_001146685
Entrez ID:643965
Nearest Unigene:Hs.729765
Nearest Refseq:NM_001146685
Nearest Ensembl:ENSG00000205116
Gene Name:transmembrane protein 88B
Gene Alias:-
Gene Description:transmembrane protein 88B
Gene Type:protein-coding
CpG%:0.02
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):