Difference between revisions of "TSS:Hg 9990.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000234875.8:0 NM_000983:0 uc001amd.4:0 AK097075:0 BC066314:0 BC035566:0 D17652:0 AK311749:0 BC058887:5 BC046108:6 X59357:6 KJ892031:8 CR456873:9 E...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HBP15= | ||
| + | |HBP15/L22= | ||
| + | |L22= | ||
|all_trans=ENST00000234875.8:0 NM_000983:0 uc001amd.4:0 AK097075:0 BC066314:0 BC035566:0 D17652:0 AK311749:0 BC058887:5 BC046108:6 X59357:6 KJ892031:8 CR456873:9 ENST00000480661.1:19 uc057bte.1:19 ENST00000465387.5:29 uc057bth.1:29 | |all_trans=ENST00000234875.8:0 NM_000983:0 uc001amd.4:0 AK097075:0 BC066314:0 BC035566:0 D17652:0 AK311749:0 BC058887:5 BC046108:6 X59357:6 KJ892031:8 CR456873:9 ENST00000480661.1:19 uc057bte.1:19 ENST00000465387.5:29 uc057bth.1:29 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=6199630 | |end=6199630 | ||
| + | |end_of_center_position=6199606 | ||
|entrez_id=6146 | |entrez_id=6146 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=EAP | + | |gene_alias=EAP |
|gene_description=ribosomal protein L22 | |gene_description=ribosomal protein L22 | ||
|gene_id=6146 | |gene_id=6146 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=6199581 | |start=6199581 | ||
| + | |start_of_center_position=6199605 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000234875.8 NM_000983 uc001amd.4 AK097075 BC066314 BC035566 D17652 AK311749 | |transcript_name=ENST00000234875.8 NM_000983 uc001amd.4 AK097075 BC066314 BC035566 D17652 AK311749 | ||
Revision as of 16:28, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6199605 |
|---|---|
| End of the center position in the TSS region: | 6199606 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000234875.8 NM_000983 uc001amd.4 AK097075 BC066314 BC035566 D17652 AK311749 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000234875.8:0 NM_000983:0 uc001amd.4:0 AK097075:0 BC066314:0 BC035566:0 D17652:0 AK311749:0 BC058887:5 BC046108:6 X59357:6 KJ892031:8 CR456873:9 ENST00000480661.1:19 uc057bte.1:19 ENST00000465387.5:29 uc057bth.1:29 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_000983 |
| Entrez ID: | 6146 |
| Nearest Unigene: | Hs.515329 |
| Nearest Refseq: | NM_000983 |
| Nearest Ensembl: | ENSG00000116251 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | EAP |
| Gene Description: | ribosomal protein L22 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
