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Difference between revisions of "TSS:Hg 10097.1"

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Line 9: Line 9:
 
|distance_to_tss=24
 
|distance_to_tss=24
 
|end=8026318
 
|end=8026318
 +
|end_of_center_position=8026310
 
|entrez_id=54206
 
|entrez_id=54206
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=GENE-33|MIG-6|MIG6|RALT
+
|gene_alias=GENE-33
 
|gene_description=ERBB receptor feedback inhibitor 1
 
|gene_description=ERBB receptor feedback inhibitor 1
 
|gene_id=54206
 
|gene_id=54206
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=8026300
 
|start=8026300
 +
|start_of_center_position=8026309
 
|strand=-
 
|strand=-
 
|tata_box="-32(CTATATATAGAG,+,0.00)"
 
|tata_box="-32(CTATATATAGAG,+,0.00)"

Revision as of 16:49, 10 May 2019

Basic information about the TSS


TSS ID:hg_10097.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8026300
End:8026318
Strand:-
TSS Score:1
Start of the center position in the TSS region:8026309
End of the center position in the TSS region:8026310



Gene and protein annotation


Transcript_name:ENST00000377482.9 uc001aoz.4 AK096149
Distance:0
GeneID:54206
HGNC/MGI_ID:HGNC:18185
UniProt_ID:B3KTV8 I6S2Y9 Q9UJM3
Gene_name:ERBB receptor feedback inhibitor 1
Gene_symbol:ERRFI1
Gene_synonyms:GENE-33 MIG-6 RALT
Gene_source:HGNC:18185



Transcript annotation


Transcript_name:ENST00000377482.9 uc001aoz.4 AK096149
Distance:0
Num_trans:12
All_trans:ENST00000377482.9:0 uc001aoz.4:0 AK096149:0 ENST00000469499.5:5 ENST00000487559.1:5 uc057bym.1:5 uc057byn.1:5 BC025337:5 AK315718:13 NM_018948:-15 ENST00000474874.5:18 uc057byk.1:18



TATA-Box annotation


Distance to TSS:24
Nearest PromoterID:NM_018948
Entrez ID:54206
Nearest Unigene:Hs.605445
Nearest Refseq:NM_018948
Nearest Ensembl:ENSG00000116285
Gene Name:ERBB receptor feedback inhibitor 1
Gene Alias:GENE-33
Gene Description:ERBB receptor feedback inhibitor 1
Gene Type:protein-coding
CpG%:0.155
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-32(CTATATATAGAG,+,0.00)"