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Difference between revisions of "TSS:Hg 10117.1"

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Line 10: Line 10:
 
|distance_to_tss=-36
 
|distance_to_tss=-36
 
|end=8423749
 
|end=8423749
 +
|end_of_center_position=8423723
 
|entrez_id=473
 
|entrez_id=473
 
|gc_percent=0.840796
 
|gc_percent=0.840796
|gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH
+
|gene_alias=ARG
 
|gene_description=arginine-glutamic acid dipeptide repeats
 
|gene_description=arginine-glutamic acid dipeptide repeats
 
|gene_id=473
 
|gene_id=473
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=8423696
 
|start=8423696
 +
|start_of_center_position=8423722
 
|strand=-
 
|strand=-
 
|transcript_name=NM_001042682
 
|transcript_name=NM_001042682

Revision as of 16:51, 10 May 2019

Basic information about the TSS


TSS ID:hg_10117.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8423696
End:8423749
Strand:-
TSS Score:1
Start of the center position in the TSS region:8423722
End of the center position in the TSS region:8423723



Gene and protein annotation


Transcript_name:NM_001042682
Distance:10
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:Q9P2R6
Gene_name:arginine-glutamic acid dipeptide (RE) repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:NM_001042682
Distance:10
Num_trans:10
All_trans:NM_001042682:10 ENST00000476556.5:31 ENST00000492766.5:31 uc001apd.4:31 uc057bzd.1:31 AF016005:31 ENST00000460659.5:278 uc057bzc.1:278 ENST00000465125.1:-485 uc057bze.1:-485



TATA-Box annotation


Distance to TSS:-36
Nearest PromoterID:NM_001042682
Entrez ID:473
Nearest Unigene:Hs.463041
Nearest Refseq:NM_012102
Nearest Ensembl:ENSG00000142599
Gene Name:arginine-glutamic acid dipeptide (RE) repeats
Gene Alias:ARG
Gene Description:arginine-glutamic acid dipeptide repeats
Gene Type:protein-coding
CpG%:0.18
GC%:0.840796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):