Difference between revisions of "TSS:Hg 10253.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-62 | |distance_to_tss=-62 | ||
|end=9910324 | |end=9910324 | ||
| + | |end_of_center_position=9910320 | ||
|entrez_id=56998 | |entrez_id=56998 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=9910315 | |start=9910315 | ||
| + | |start_of_center_position=9910319 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000400904.7 uc001aql.2 | |transcript_name=ENST00000400904.7 uc001aql.2 | ||
Revision as of 17:13, 10 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9910319 |
|---|---|
| End of the center position in the TSS region: | 9910320 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000400904.7 uc001aql.2 |
|---|---|
| Distance: | -12 |
| Num_trans: | 10 |
| All_trans: | ENST00000400904.7:-12 uc001aql.2:-12 ENST00000377263.5:53 uc001aqk.2:53 NM_001012329:58 NM_020248:58 BC014300:75 BC046920:77 BC035794:90 AB021262:92 |
TATA-Box annotation
| Distance to TSS: | -62 |
|---|---|
| Nearest PromoterID: | NM_001012329 |
| Entrez ID: | 56998 |
| Nearest Unigene: | Hs.463759 |
| Nearest Refseq: | NM_020248 |
| Nearest Ensembl: | ENSG00000178585 |
| Gene Name: | catenin beta interacting protein 1 |
| Gene Alias: | ICAT |
| Gene Description: | catenin beta interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
