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Difference between revisions of "TSS:Hg 10262.1"

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Line 8: Line 8:
 
|distance_to_tss=4
 
|distance_to_tss=4
 
|end=10472566
 
|end=10472566
 +
|end_of_center_position=10472553
 
|entrez_id=1676
 
|entrez_id=1676
 
|gc_percent=0.621891
 
|gc_percent=0.621891
|gene_alias=DFF-45|DFF1|ICAD
+
|gene_alias=DFF-45
 
|gene_description=DNA fragmentation factor subunit alpha
 
|gene_description=DNA fragmentation factor subunit alpha
 
|gene_id=1676
 
|gene_id=1676
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=10472538
 
|start=10472538
 +
|start_of_center_position=10472552
 
|strand=-
 
|strand=-
 
|transcript_name=NM_213566 NM_004401
 
|transcript_name=NM_213566 NM_004401

Revision as of 17:18, 10 May 2019

Basic information about the TSS


TSS ID:hg_10262.1
Species:human
Chr:chr1
TSS Classification:yes
Start:10472538
End:10472566
Strand:-
TSS Score:1
Start of the center position in the TSS region:10472552
End of the center position in the TSS region:10472553



Gene and protein annotation


Transcript_name:NM_213566 NM_004401
Distance:0
GeneID:1676
HGNC/MGI_ID:HGNC:2772
UniProt_ID:O00273
Gene_name:DNA fragmentation factor subunit alpha
Gene_symbol:DFFA
Gene_synonyms:DFF-45 DFF1 DFF45 ICAD
Gene_source:HGNC:2772



Transcript annotation


Transcript_name:NM_213566 NM_004401
Distance:0
Num_trans:20
All_trans:NM_213566:0 NM_004401:0 ENST00000377038.7:13 uc001arj.4:13 BC007112:13 U91985:25 AK222546:47 AK313317:49 ENST00000377036.2:51 uc001ark.4:51 BC007721:51 AF087573:51 ENST00000476658.5:60 uc057cdb.1:60 AF103799:62 BC000037:63 BT006980:81 KJ896700:81 AB590590:81 CU675773:81



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_213566
Entrez ID:1676
Nearest Unigene:Hs.484782
Nearest Refseq:NM_004401
Nearest Ensembl:ENSG00000160049
Gene Name:DNA fragmentation factor subunit alpha
Gene Alias:DFF-45
Gene Description:DNA fragmentation factor subunit alpha
Gene Type:protein-coding
CpG%:0.095
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):