Difference between revisions of "TSS:Hg 10267.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=102302 | |distance_to_tss=102302 | ||
|end=10694377 | |end=10694377 | ||
| + | |end_of_center_position=10694375 | ||
|entrez_id=54897 | |entrez_id=54897 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=CAS11 | + | |gene_alias=CAS11 |
|gene_description=castor zinc finger 1 | |gene_description=castor zinc finger 1 | ||
|gene_id=54897 | |gene_id=54897 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=10694371 | |start=10694371 | ||
| + | |start_of_center_position=10694374 | ||
|strand=- | |strand=- | ||
|tata_box="-32(GCTTTAAAACAA,+,0.00)" | |tata_box="-32(GCTTTAAAACAA,+,0.00)" | ||
Revision as of 17:20, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10694374 |
|---|---|
| End of the center position in the TSS region: | 10694375 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK311700 |
|---|---|
| Distance: | -72 |
| Num_trans: | 7 |
| All_trans: | AK311700:-72 AK293839:-73 ENST00000496432.6:-102 uc009vmx.3:-102 ENST00000478728.2:460 uc057cdk.1:460 BC051883:467 |
TATA-Box annotation
| Distance to TSS: | 102302 |
|---|---|
| Nearest PromoterID: | NM_001079843 |
| Entrez ID: | 54897 |
| Nearest Unigene: | Hs.439894 |
| Nearest Refseq: | NM_017766 |
| Nearest Ensembl: | ENSG00000130940 |
| Gene Name: | castor zinc finger 1 |
| Gene Alias: | CAS11 |
| Gene Description: | castor zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(GCTTTAAAACAA,+,0.00)" |
