Difference between revisions of "TSS:Hg 10303.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=264 | |distance_to_tss=264 | ||
|end=11680978 | |end=11680978 | ||
| + | |end_of_center_position=11680951 | ||
|entrez_id=10459 | |entrez_id=10459 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=FANCV | + | |gene_alias=FANCV |
|gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | |gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
|gene_id=10459 | |gene_id=10459 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=11680922 | |start=11680922 | ||
| + | |start_of_center_position=11680950 | ||
|strand=- | |strand=- | ||
|tata_box="71(CCTTTTCGGGGG,+,0.00)" | |tata_box="71(CCTTTTCGGGGG,+,0.00)" | ||
Revision as of 17:29, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11680950 |
|---|---|
| End of the center position in the TSS region: | 11680951 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000445656.5 ENST00000376664.10 uc057cgt.1 uc057cgv.1 |
|---|---|
| Distance: | -133 |
| Num_trans: | 20 |
| All_trans: | ENST00000445656.5:-133 ENST00000376664.10:-133 uc057cgt.1:-133 uc057cgv.1:-133 ENST00000376669.9:-140 uc057cgs.1:-140 AK027327:-149 AF139365:-152 ENST00000456915.1:-153 uc057cgu.1:-153 ENST00000376692.8:-236 NM_006341:-236 uc001asp.4:-236 AF157482:-236 AF080398:309 AF072933:310 BC015244:320 CU677251:322 DQ891038:322 DQ894217:322 |
TATA-Box annotation
| Distance to TSS: | 264 |
|---|---|
| Nearest PromoterID: | NM_006341 |
| Entrez ID: | 10459 |
| Nearest Unigene: | Hs.19400 |
| Nearest Refseq: | NM_006341 |
| Nearest Ensembl: | ENSG00000116670 |
| Gene Name: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Alias: | FANCV |
| Gene Description: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "71(CCTTTTCGGGGG,+,0.00)" |
