Difference between revisions of "TSS:Hg 10323.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-618 | |distance_to_tss=-618 | ||
|end=11805480 | |end=11805480 | ||
| + | |end_of_center_position=11805478 | ||
|entrez_id=1185 | |entrez_id=1185 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=11805475 | |start=11805475 | ||
| + | |start_of_center_position=11805477 | ||
|strand=- | |strand=- | ||
|tata_box="-32(CCTTTTAAACCT,+,0.00)" | |tata_box="-32(CCTTTTAAACCT,+,0.00)" | ||
Revision as of 17:32, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11805477 |
|---|---|
| End of the center position in the TSS region: | 11805478 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376585.5 ENST00000423400.5 ENST00000431243.5 uc001atd.2 uc057chs.1 uc057cht.1 AY046561 AY046562 AY046563 |
|---|---|
| Distance: | 63 |
| Num_trans: | 17 |
| All_trans: | ENST00000376585.5:63 ENST00000423400.5:63 ENST00000431243.5:63 uc001atd.2:63 uc057chs.1:63 uc057cht.1:63 AY046561:63 AY046562:63 AY046563:63 ENST00000413656.5:182 uc057chr.1:182 AY046565:182 BC053509:-445 ENST00000418034.1:-456 uc057chq.1:-456 AY046564:-456 AK312907:-484 |
TATA-Box annotation
| Distance to TSS: | -618 |
|---|---|
| Nearest PromoterID: | NM_001256959 |
| Entrez ID: | 1185 |
| Nearest Unigene: | Hs.193043 |
| Nearest Refseq: | NM_001286 |
| Nearest Ensembl: | ENSG00000011021 |
| Gene Name: | methylenetetrahydrofolate reductase (NAD(P)H) |
| Gene Alias: | CLC-6 |
| Gene Description: | chloride voltage-gated channel 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(CCTTTTAAACCT,+,0.00)" |
