Difference between revisions of "TSS:Hg 10339.1"
From referenceTSS
| Line 13: | Line 13: | ||
|distance_to_tss=-104 | |distance_to_tss=-104 | ||
|end=11847890 | |end=11847890 | ||
| + | |end_of_center_position=11847887 | ||
|entrez_id=4878 | |entrez_id=4878 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=ANF | + | |gene_alias=ANF |
|gene_description=natriuretic peptide A | |gene_description=natriuretic peptide A | ||
|gene_id=4878 | |gene_id=4878 | ||
| Line 31: | Line 32: | ||
|species=human | |species=human | ||
|start=11847883 | |start=11847883 | ||
| + | |start_of_center_position=11847886 | ||
|strand=- | |strand=- | ||
|tata_box="-34(AACTTTAAAAGG,-,0.00),-33(ACTTTAAAAGGG,+,0.00),-32(CTTTAAAAGGGC,+,0.00),72(GGCTATAAAAAG,-,0.00)" | |tata_box="-34(AACTTTAAAAGG,-,0.00),-33(ACTTTAAAAGGG,+,0.00),-32(CTTTAAAAGGGC,+,0.00),72(GGCTATAAAAAG,-,0.00)" | ||
Revision as of 17:34, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11847886 |
|---|---|
| End of the center position in the TSS region: | 11847887 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376480.7 ENST00000610706.1 NM_006172 uc001ati.4 uc057cif.1 BC005893 |
|---|---|
| Distance: | 101 |
| Num_trans: | 15 |
| All_trans: | ENST00000376480.7:101 ENST00000610706.1:101 NM_006172:101 uc001ati.4:101 uc057cif.1:101 BC005893:101 M30262:106 DQ893115:195 DQ896389:195 EU176780:195 KJ897262:198 KR710208:198 AB528342:199 ENST00000376476.1:-455 uc057cig.1:-455 |
TATA-Box annotation
| Distance to TSS: | -104 |
|---|---|
| Nearest PromoterID: | NM_006172 |
| Entrez ID: | 4878 |
| Nearest Unigene: | Hs.75640 |
| Nearest Refseq: | NM_006172 |
| Nearest Ensembl: | ENSG00000175206 |
| Gene Name: | natriuretic peptide A |
| Gene Alias: | ANF |
| Gene Description: | natriuretic peptide A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(AACTTTAAAAGG,-,0.00),-33(ACTTTAAAAGGG,+,0.00),-32(CTTTAAAAGGGC,+,0.00),72(GGCTATAAAAAG,-,0.00)" |
