Difference between revisions of "TSS:Hg 223495.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000616661.4:104 NM_004753:104 uc031tpa.2:104 BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 BC002730:372 AK222593:433 AF061741:4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RDH17= | ||
| + | |Rsdr1= | ||
| + | |SDR1= | ||
| + | |SDR16C1= | ||
|all_trans=ENST00000616661.4:104 NM_004753:104 uc031tpa.2:104 BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 BC002730:372 AK222593:433 AF061741:434 CU678154:486 KJ897985:487 DQ893006:487 DQ896252:487 DQ426869:492 | |all_trans=ENST00000616661.4:104 NM_004753:104 uc031tpa.2:104 BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 BC002730:372 AK222593:433 AF061741:434 CU678154:486 KJ897985:487 DQ893006:487 DQ896252:487 DQ426869:492 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-116 | |distance_to_tss=-116 | ||
|end=12617860 | |end=12617860 | ||
| + | |end_of_center_position=12617848 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=DD83.1 | + | |gene_alias=DD83.1 |
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
|gene_id=9249 | |gene_id=9249 | ||
| Line 22: | Line 27: | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
|num_trans=16 | |num_trans=16 | ||
| + | |retSDR1= | ||
|species=human | |species=human | ||
|start=12617834 | |start=12617834 | ||
| + | |start_of_center_position=12617847 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 | |transcript_name=ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 | ||
Revision as of 17:49, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12617847 |
|---|---|
| End of the center position in the TSS region: | 12617848 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 |
|---|---|
| Distance: | 104 |
| Num_trans: | 16 |
| All_trans: | ENST00000616661.4:104 NM_004753:104 uc031tpa.2:104 BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 BC002730:372 AK222593:433 AF061741:434 CU678154:486 KJ897985:487 DQ893006:487 DQ896252:487 DQ426869:492 |
TATA-Box annotation
| Distance to TSS: | -116 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase (SDR family) member 3 |
| Gene Alias: | DD83.1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
