Difference between revisions of "TSS:Hg 10524.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=16156081 | |end=16156081 | ||
| + | |end_of_center_position=16156071 | ||
|entrez_id=1969 | |entrez_id=1969 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=ARCC2 | + | |gene_alias=ARCC2 |
|gene_description=EPH receptor A2 | |gene_description=EPH receptor A2 | ||
|gene_id=1969 | |gene_id=1969 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=16156059 | |start=16156059 | ||
| + | |start_of_center_position=16156070 | ||
|strand=- | |strand=- | ||
|tata_box="-85(GCCCCTTTAAAG,-,0.00),-84(CCCCTTTAAAGA,-,0.00),-83(CCCTTTAAAGAC,+,0.00),-83(CCCTTTAAAGAC,-,0.00)" | |tata_box="-85(GCCCCTTTAAAG,-,0.00),-84(CCCCTTTAAAGA,-,0.00),-83(CCCTTTAAAGAC,+,0.00),-83(CCCTTTAAAGAC,-,0.00)" | ||
Revision as of 18:25, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16156070 |
|---|---|
| End of the center position in the TSS region: | 16156071 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK296788 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | AK296788:0 ENST00000358432.7:-6 NM_004431:-6 uc001aya.2:-6 ENST00000461614.1:8 uc057cqn.1:8 BC037166:10 M59371:17 DQ895231:127 EU176326:127 EU826606:128 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001329090 |
| Entrez ID: | 1969 |
| Nearest Unigene: | Hs.171596 |
| Nearest Refseq: | NM_004431 |
| Nearest Ensembl: | ENSG00000142627 |
| Gene Name: | EPH receptor A2 |
| Gene Alias: | ARCC2 |
| Gene Description: | EPH receptor A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-85(GCCCCTTTAAAG,-,0.00),-84(CCCCTTTAAAGA,-,0.00),-83(CCCTTTAAAGAC,+,0.00),-83(CCCTTTAAAGAC,-,0.00)" |
