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Difference between revisions of "TSS:Hg 10526.1"

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Line 6: Line 6:
 
|distance_to_tss=5684
 
|distance_to_tss=5684
 
|end=16206994
 
|end=16206994
 +
|end_of_center_position=16206987
 
|entrez_id=128272
 
|entrez_id=128272
 
|gc_percent=0.761194
 
|gc_percent=0.761194
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=16206979
 
|start=16206979
 +
|start_of_center_position=16206986
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000471928.1 uc057cqu.1
 
|transcript_name=ENST00000471928.1 uc057cqu.1

Revision as of 18:25, 10 May 2019

Basic information about the TSS


TSS ID:hg_10526.1
Species:human
Chr:chr1
TSS Classification:yes
Start:16206979
End:16206994
Strand:-
TSS Score:1
Start of the center position in the TSS region:16206986
End of the center position in the TSS region:16206987



Gene and protein annotation


Transcript_name:ENST00000471928.1 uc057cqu.1
Distance:0
GeneID:128272
HGNC/MGI_ID:HGNC:26604
UniProt_ID:
Gene_name:Rho guanine nucleotide exchange factor 19
Gene_symbol:ARHGEF19
Gene_synonyms:FLJ33962 WGEF
Gene_source:HGNC:26604



Transcript annotation


Transcript_name:ENST00000471928.1 uc057cqu.1
Distance:0
Num_trans:11
All_trans:ENST00000471928.1:0 uc057cqu.1:0 ENST00000478117.5:-17 uc057cqr.1:-17 AL137736:-17 ENST00000449495.1:437 uc057cqs.1:437 ENST00000478210.1:454 ENST00000441785.1:454 uc057cqt.1:454 uc057cqv.1:454



TATA-Box annotation


Distance to TSS:5684
Nearest PromoterID:NM_153213
Entrez ID:128272
Nearest Unigene:Hs.591532
Nearest Refseq:NM_153213
Nearest Ensembl:ENSG00000142632
Gene Name:Rho guanine nucleotide exchange factor 19
Gene Alias:WGEF
Gene Description:Rho guanine nucleotide exchange factor 19
Gene Type:protein-coding
CpG%:0.135
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):