Difference between revisions of "TSS:Hg 92912.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000522707.1:-116 uc064mmk.1:-116 |chr=chr8 |cpg_percent=0.01 |distance=-116 |distance_to_tss=-1045 |end=42502512 |entrez_id=6575 |gc_percent=0.517...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GLVR2= | ||
| + | |IBGC1= | ||
| + | |IBGC3= | ||
| + | |MLVAR= | ||
| + | |PIT-2= | ||
| + | |PIT2= | ||
| + | |RAM1= | ||
| + | |Ram-1= | ||
|all_trans=ENST00000522707.1:-116 uc064mmk.1:-116 | |all_trans=ENST00000522707.1:-116 uc064mmk.1:-116 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=-1045 | |distance_to_tss=-1045 | ||
|end=42502512 | |end=42502512 | ||
| + | |end_of_center_position=42502505 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=GLVR-2 | + | |gene_alias=GLVR-2 |
|gene_description=solute carrier family 20 member 2 | |gene_description=solute carrier family 20 member 2 | ||
|gene_id=6575 | |gene_id=6575 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=42502497 | |start=42502497 | ||
| + | |start_of_center_position=42502504 | ||
|strand=- | |strand=- | ||
|tata_box="88(GGCTTTTTAAGC,-,0.00)" | |tata_box="88(GGCTTTTTAAGC,-,0.00)" | ||
Revision as of 18:27, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42502504 |
|---|---|
| End of the center position in the TSS region: | 42502505 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000522707.1 uc064mmk.1 |
|---|---|
| Distance: | -116 |
| Num_trans: | 2 |
| All_trans: | ENST00000522707.1:-116 uc064mmk.1:-116 |
TATA-Box annotation
| Distance to TSS: | -1045 |
|---|---|
| Nearest PromoterID: | NM_001257180 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "88(GGCTTTTTAAGC,-,0.00)" |
