Difference between revisions of "TSS:Mm 1009.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=Y14042:185 Y14041:185 |chr=chr1 |cpg_percent=0.005 |distance=185 |distance_to_tss=-4381 |end=58726178 |entrez_id=12633 |gc_percent=0.40796 |gene_alias=2...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |A430105C05Rik= | ||
| + | |CLARP= | ||
| + | |Cash= | ||
| + | |Casper= | ||
| + | |ENSMUSG00000072980= | ||
| + | |FLAME= | ||
| + | |FLAME-1= | ||
| + | |Flip= | ||
| + | |Gm9845= | ||
| + | |I-FLICE= | ||
| + | |MRIT= | ||
|all_trans=Y14042:185 Y14041:185 | |all_trans=Y14042:185 Y14041:185 | ||
| + | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 18: | ||
|distance_to_tss=-4381 | |distance_to_tss=-4381 | ||
|end=58726178 | |end=58726178 | ||
| + | |end_of_center_position=58726172 | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 24: | Line 37: | ||
|species=mouse | |species=mouse | ||
|start=58726164 | |start=58726164 | ||
| + | |start_of_center_position=58726171 | ||
|strand=+ | |strand=+ | ||
|transcript_name=Y14042 Y14041 | |transcript_name=Y14042 Y14041 | ||
Revision as of 18:32, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58726171 |
|---|---|
| End of the center position in the TSS region: | 58726172 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | Y14042 Y14041 |
|---|---|
| Distance: | 185 |
| Num_trans: | 2 |
| All_trans: | Y14042:185 Y14041:185 |
TATA-Box annotation
| Distance to TSS: | -4381 |
|---|---|
| Nearest PromoterID: | NM_001293805 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
