Difference between revisions of "TSS:Hg 1060.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=68 | |distance_to_tss=68 | ||
|end=19312334 | |end=19312334 | ||
| + | |end_of_center_position=19312315 | ||
|entrez_id=54896 | |entrez_id=54896 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=19312294 | |start=19312294 | ||
| + | |start_of_center_position=19312314 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000375155.7 ENST00000375153.7 ENST00000469076.5 uc001bby.4 uc001bca.4 uc057cwq.1 AK130175 AK000327 AK125580 AK130171 AK172745 | |transcript_name=ENST00000375155.7 ENST00000375153.7 ENST00000469076.5 uc001bby.4 uc001bca.4 uc057cwq.1 AK130175 AK000327 AK125580 AK130171 AK172745 | ||
Revision as of 18:51, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19312314 |
|---|---|
| End of the center position in the TSS region: | 19312315 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375155.7 ENST00000375153.7 ENST00000469076.5 uc001bby.4 uc001bca.4 uc057cwq.1 AK130175 AK000327 AK125580 AK130171 AK172745 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000375155.7:0 ENST00000375153.7:0 ENST00000469076.5:0 uc001bby.4:0 uc001bca.4:0 uc057cwq.1:0 AK130175:0 AK000327:0 AK125580:0 AK130171:0 AK172745:0 ENST00000400548.6:7 uc001bbz.4:7 BC015324:7 BC021040:25 NM_001287531:-49 NM_017765:-49 NM_001040126:-49 NM_001040125:-49 NR_109848:-49 ENST00000497827.1:395 uc057cwr.1:395 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_001040125 |
| Entrez ID: | 54896 |
| Nearest Unigene: | Hs.647620 |
| Nearest Refseq: | NM_017765 |
| Nearest Ensembl: | ENSG00000040487 |
| Gene Name: | PQ loop repeat containing 2 |
| Gene Alias: | - |
| Gene Description: | PQ loop repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
