Difference between revisions of "TSS:Mm 6411.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=L12447:-74 BC026805:108 ENSMUST00000137339.1:138 BC054812:138 X81583:210 NM_010518:-414 uc007bkx.1:-414 BC057447:-414 ENSMUST00000027377.8:-433 AK142108...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW208790= | ||
| + | |IGFBP-5= | ||
| + | |IGFBP-5P= | ||
|all_trans=L12447:-74 BC026805:108 ENSMUST00000137339.1:138 BC054812:138 X81583:210 NM_010518:-414 uc007bkx.1:-414 BC057447:-414 ENSMUST00000027377.8:-433 AK142108:-433 | |all_trans=L12447:-74 BC026805:108 ENSMUST00000137339.1:138 BC054812:138 X81583:210 NM_010518:-414 uc007bkx.1:-414 BC057447:-414 ENSMUST00000027377.8:-433 AK142108:-433 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=433 | |distance_to_tss=433 | ||
|end=72874451 | |end=72874451 | ||
| + | |end_of_center_position=72874432 | ||
|entrez_id=16011 | |entrez_id=16011 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=AI256729 | + | |gene_alias=AI256729 |
|gene_description=insulin-like growth factor binding protein 5 | |gene_description=insulin-like growth factor binding protein 5 | ||
|gene_id=16011 | |gene_id=16011 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=72874412 | |start=72874412 | ||
| + | |start_of_center_position=72874431 | ||
|strand=- | |strand=- | ||
|tata_box="-74(CCTTTTCAAGGC,+,0.00)" | |tata_box="-74(CCTTTTCAAGGC,+,0.00)" | ||
Revision as of 20:03, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72874431 |
|---|---|
| End of the center position in the TSS region: | 72874432 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | L12447 |
|---|---|
| Distance: | -74 |
| Num_trans: | 10 |
| All_trans: | L12447:-74 BC026805:108 ENSMUST00000137339.1:138 BC054812:138 X81583:210 NM_010518:-414 uc007bkx.1:-414 BC057447:-414 ENSMUST00000027377.8:-433 AK142108:-433 |
TATA-Box annotation
| Distance to TSS: | 433 |
|---|---|
| Nearest PromoterID: | NM_010518 |
| Entrez ID: | 16011 |
| Nearest Unigene: | Mm.405761 |
| Nearest Refseq: | NM_010518 |
| Nearest Ensembl: | ENSMUSG00000026185 |
| Gene Name: | insulin-like growth factor binding protein 5 |
| Gene Alias: | AI256729 |
| Gene Description: | insulin-like growth factor binding protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-74(CCTTTTCAAGGC,+,0.00)" |
