Difference between revisions of "TSS:Mm 28833.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000098839.2:-116 AK143345:-116 AB345824:-331 |chr=chr3 |cpg_percent=0.04 |distance=-116 |distance_to_tss=-288 |end=96557699 |entrez_id=56338 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA682105= | ||
| + | |Hyplip1= | ||
| + | |THIF= | ||
| + | |Tbp-2= | ||
| + | |VDUP1= | ||
|all_trans=ENSMUST00000098839.2:-116 AK143345:-116 AB345824:-331 | |all_trans=ENSMUST00000098839.2:-116 AK143345:-116 AB345824:-331 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-288 | |distance_to_tss=-288 | ||
|end=96557699 | |end=96557699 | ||
| + | |end_of_center_position=96557670 | ||
|entrez_id=56338 | |entrez_id=56338 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=1200008J08Rik | + | |gene_alias=1200008J08Rik |
|gene_description=thioredoxin interacting protein | |gene_description=thioredoxin interacting protein | ||
|gene_id=100038464 | |gene_id=100038464 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=96557639 | |start=96557639 | ||
| + | |start_of_center_position=96557669 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000098839.2 AK143345 | |transcript_name=ENSMUST00000098839.2 AK143345 | ||
Revision as of 20:11, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 96557669 |
|---|---|
| End of the center position in the TSS region: | 96557670 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000098839.2 AK143345 |
|---|---|
| Distance: | -116 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000098839.2:-116 AK143345:-116 AB345824:-331 |
TATA-Box annotation
| Distance to TSS: | -288 |
|---|---|
| Nearest PromoterID: | NM_001009935 |
| Entrez ID: | 56338 |
| Nearest Unigene: | Mm.410189 |
| Nearest Refseq: | NM_023719 |
| Nearest Ensembl: | ENSMUSG00000038393 |
| Gene Name: | predicted gene 15441 |
| Gene Alias: | 1200008J08Rik |
| Gene Description: | thioredoxin interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
