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Difference between revisions of "TSS:Hg 175329.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000602468.5:0 uc060xcn.1:0 ENST00000601669.6:20 uc060xco.1:20 ENST00000441942.6:37 uc060xcp.1:37 ENST00000602653.5:70 uc060xcq.1:70 ENST0000060279...")
 
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|distance_to_tss=-6101
 
|distance_to_tss=-6101
 
|end=35399511
 
|end=35399511
 +
|end_of_center_position=35399506
 
|entrez_id=100128682
 
|entrez_id=100128682
 
|gc_percent=0.452736
 
|gc_percent=0.452736
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|species=human
 
|species=human
 
|start=35399500
 
|start=35399500
 +
|start_of_center_position=35399505
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000602468.5 uc060xcn.1
 
|transcript_name=ENST00000602468.5 uc060xcn.1

Revision as of 20:46, 10 May 2019

Basic information about the TSS


TSS ID:hg_175329.1
Species:human
Chr:chr19
TSS Classification:yes
Start:35399500
End:35399511
Strand:+
TSS Score:1
Start of the center position in the TSS region:35399505
End of the center position in the TSS region:35399506



Gene and protein annotation


Transcript_name:ENST00000602468.5 uc060xcn.1
Distance:0
GeneID:100128682
HGNC/MGI_ID:HGNC:51270
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 1531
Gene_symbol:LINC01531
Gene_synonyms:
Gene_source:HGNC:51270



Transcript annotation


Transcript_name:ENST00000602468.5 uc060xcn.1
Distance:0
Num_trans:10
All_trans:ENST00000602468.5:0 uc060xcn.1:0 ENST00000601669.6:20 uc060xco.1:20 ENST00000441942.6:37 uc060xcp.1:37 ENST00000602653.5:70 uc060xcq.1:70 ENST00000602796.5:71 uc060xcr.1:71



TATA-Box annotation


Distance to TSS:-6101
Nearest PromoterID:NR_040046
Entrez ID:100128682
Nearest Unigene:Hs.570008
Nearest Refseq:NR_040046
Nearest Ensembl:ENSG00000205786
Gene Name:long intergenic non-protein coding RNA 1531
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1531
Gene Type:ncRNA
CpG%:0.01
GC%:0.452736
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):