Difference between revisions of "TSS:Hg 181556.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000585392.2:0 ENST00000587367.5:0 ENST00000391932.7:0 ENST00000590212.1:0 uc061abj.1:0 uc061abk.1:0 uc002pcv.4:0 uc061abn.1:0 AK291912:0 U15008:0...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SNRPD1= | ||
| + | |Sm-D2= | ||
|all_trans=ENST00000585392.2:0 ENST00000587367.5:0 ENST00000391932.7:0 ENST00000590212.1:0 uc061abj.1:0 uc061abk.1:0 uc002pcv.4:0 uc061abn.1:0 AK291912:0 U15008:0 BC000486:2 ENST00000588599.5:145 uc061abl.1:145 NM_004597:-217 NM_177542:-217 ENST00000588301.5:-348 uc061abm.1:-348 ENST00000342669.7:-365 uc002pcw.4:-365 | |all_trans=ENST00000585392.2:0 ENST00000587367.5:0 ENST00000391932.7:0 ENST00000590212.1:0 uc061abj.1:0 uc061abk.1:0 uc002pcv.4:0 uc061abn.1:0 AK291912:0 U15008:0 BC000486:2 ENST00000588599.5:145 uc061abl.1:145 NM_004597:-217 NM_177542:-217 ENST00000588301.5:-348 uc061abm.1:-348 ENST00000342669.7:-365 uc002pcw.4:-365 | ||
|chr=chr19 | |chr=chr19 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
|end=45691968 | |end=45691968 | ||
| + | |end_of_center_position=45691942 | ||
|entrez_id=6633 | |entrez_id=6633 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=SMD2 | + | |gene_alias=SMD2 |
|gene_description=small nuclear ribonucleoprotein D2 polypeptide | |gene_description=small nuclear ribonucleoprotein D2 polypeptide | ||
|gene_id=6633 | |gene_id=6633 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=45691915 | |start=45691915 | ||
| + | |start_of_center_position=45691941 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000585392.2 ENST00000587367.5 ENST00000391932.7 ENST00000590212.1 uc061abj.1 uc061abk.1 uc002pcv.4 uc061abn.1 AK291912 U15008 | |transcript_name=ENST00000585392.2 ENST00000587367.5 ENST00000391932.7 ENST00000590212.1 uc061abj.1 uc061abk.1 uc002pcv.4 uc061abn.1 AK291912 U15008 | ||
Revision as of 00:13, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45691941 |
|---|---|
| End of the center position in the TSS region: | 45691942 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000585392.2 ENST00000587367.5 ENST00000391932.7 ENST00000590212.1 uc061abj.1 uc061abk.1 uc002pcv.4 uc061abn.1 AK291912 U15008 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000585392.2:0 ENST00000587367.5:0 ENST00000391932.7:0 ENST00000590212.1:0 uc061abj.1:0 uc061abk.1:0 uc002pcv.4:0 uc061abn.1:0 AK291912:0 U15008:0 BC000486:2 ENST00000588599.5:145 uc061abl.1:145 NM_004597:-217 NM_177542:-217 ENST00000588301.5:-348 uc061abm.1:-348 ENST00000342669.7:-365 uc002pcw.4:-365 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_177542 |
| Entrez ID: | 6633 |
| Nearest Unigene: | Hs.515472 |
| Nearest Refseq: | NM_004597 |
| Nearest Ensembl: | ENSG00000125743 |
| Gene Name: | small nuclear ribonucleoprotein D2 polypeptide |
| Gene Alias: | SMD2 |
| Gene Description: | small nuclear ribonucleoprotein D2 polypeptide |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
