Difference between revisions of "TSS:Hg 99969.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK129782:-318 |chr=chr9 |cpg_percent=0.005 |distance=-318 |distance_to_tss=98033 |end=14082776 |entrez_id=4781 |gc_percent=0.313433 |gene_alias=CTF|HMGI...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HMGIC/NFIB= | ||
| + | |NF-I/B= | ||
| + | |NF1-B= | ||
| + | |NFI-B= | ||
| + | |NFI-RED= | ||
| + | |NFIB2= | ||
| + | |NFIB3= | ||
|all_trans=AK129782:-318 | |all_trans=AK129782:-318 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=98033 | |distance_to_tss=98033 | ||
|end=14082776 | |end=14082776 | ||
| + | |end_of_center_position=14082769 | ||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=CTF | + | |gene_alias=CTF |
|gene_description=nuclear factor I B | |gene_description=nuclear factor I B | ||
|gene_id=4781 | |gene_id=4781 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=14082761 | |start=14082761 | ||
| + | |start_of_center_position=14082768 | ||
|strand=- | |strand=- | ||
|tata_box="8(GGCTTTTTATGC,-,0.00)" | |tata_box="8(GGCTTTTTATGC,-,0.00)" | ||
Revision as of 04:50, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14082768 |
|---|---|
| End of the center position in the TSS region: | 14082769 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK129782 |
|---|---|
| Distance: | -318 |
| Num_trans: | 1 |
| All_trans: | AK129782:-318 |
TATA-Box annotation
| Distance to TSS: | 98033 |
|---|---|
| Nearest PromoterID: | NM_001282787 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | nuclear factor I/B |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "8(GGCTTTTTATGC,-,0.00)" |
