Difference between revisions of "TSS:Hg 100072.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=169 | |distance_to_tss=169 | ||
|end=15307199 | |end=15307199 | ||
| + | |end_of_center_position=15307192 | ||
|entrez_id=158219 | |entrez_id=158219 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=15307183 | |start=15307183 | ||
| + | |start_of_center_position=15307191 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000506891.1 uc064sez.1 BC070139 | |transcript_name=ENST00000506891.1 uc064sez.1 BC070139 | ||
Revision as of 05:01, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 15307191 |
|---|---|
| End of the center position in the TSS region: | 15307192 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000506891.1 uc064sez.1 BC070139 |
|---|---|
| Distance: | -10 |
| Num_trans: | 22 |
| All_trans: | ENST00000506891.1:-10 uc064sez.1:-10 BC070139:-10 AK301185:-12 AK298581:-16 AK091187:-47 KJ905020:59 AK298998:-133 BC142985:-137 ENST00000512701.6:-161 ENST00000380850.8:-161 ENST00000297615.9:-161 ENST00000505732.5:-161 NM_001168340:-161 NM_001168339:-161 NM_001168341:-161 NM_152574:-161 uc003zlr.3:-161 uc011lmr.3:-161 uc011lmq.3:-161 uc010mif.3:-161 AK310482:-161 |
TATA-Box annotation
| Distance to TSS: | 169 |
|---|---|
| Nearest PromoterID: | NM_001168341 |
| Entrez ID: | 158219 |
| Nearest Unigene: | Hs.563630 |
| Nearest Refseq: | NM_152574 |
| Nearest Ensembl: | ENSG00000155158 |
| Gene Name: | tetratricopeptide repeat domain 39B |
| Gene Alias: | C9orf52 |
| Gene Description: | tetratricopeptide repeat domain 39B |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
