Difference between revisions of "TSS:Hg 100090.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=144214 | |distance_to_tss=144214 | ||
|end=15697224 | |end=15697224 | ||
| + | |end_of_center_position=15697221 | ||
|entrez_id=203238 | |entrez_id=203238 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=C9orf93 | + | |gene_alias=C9orf93 |
|gene_description=coiled-coil domain containing 171 | |gene_description=coiled-coil domain containing 171 | ||
|gene_name=CCDC171 | |gene_name=CCDC171 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=15697217 | |start=15697217 | ||
| + | |start_of_center_position=15697220 | ||
|strand=- | |strand=- | ||
|tata_box="-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)" | |tata_box="-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)" | ||
Revision as of 05:04, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 15697220 |
|---|---|
| End of the center position in the TSS region: | 15697221 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 144214 |
|---|---|
| Nearest PromoterID: | NM_001348002 |
| Entrez ID: | 203238 |
| Nearest Unigene: | Hs.17267 |
| Nearest Refseq: | NM_173550 |
| Nearest Ensembl: | ENSG00000164989 |
| Gene Name: | CCDC171 |
| Gene Alias: | C9orf93 |
| Gene Description: | coiled-coil domain containing 171 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)" |
