Difference between revisions of "TSS:Hg 100213.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=21385398 | |end=21385398 | ||
| + | |end_of_center_position=21385397 | ||
|entrez_id=3440 | |entrez_id=3440 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=IFN-alphaA | + | |gene_alias=IFN-alphaA |
|gene_description=interferon alpha 2 | |gene_description=interferon alpha 2 | ||
|gene_id=3440 | |gene_id=3440 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=21385395 | |start=21385395 | ||
| + | |start_of_center_position=21385396 | ||
|strand=- | |strand=- | ||
|tata_box="-35(CCCTATTTAAGG,-,0.00)" | |tata_box="-35(CCCTATTTAAGG,-,0.00)" | ||
Revision as of 05:31, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 21385396 |
|---|---|
| End of the center position in the TSS region: | 21385397 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000605 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | NM_000605:0 ENST00000380206.3:8 uc003zpb.4:8 M54886:8 V00544:8 V00549:8 BC104163:22 BC104164:22 BC074936:23 BC074937:23 KJ891428:67 JN591568:67 JN591569:67 JN591570:67 JN848522:67 AB590747:67 CR541921:67 V00548:85 AY255838:136 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_000605 |
| Entrez ID: | 3440 |
| Nearest Unigene: | Hs.211575 |
| Nearest Refseq: | NM_000605 |
| Nearest Ensembl: | ENSG00000188379 |
| Gene Name: | "interferon, alpha 2" |
| Gene Alias: | IFN-alphaA |
| Gene Description: | interferon alpha 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(CCCTATTTAAGG,-,0.00)" |
