Difference between revisions of "TSS:Hg 231421.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000304494.9:-41 uc003zpk.4:-41 NM_000077:-76 NM_001195132:-76 KC814157:176 L27211:176 JQ694043:176 JQ694044:176 JQ694045:176 ENST00000498124.1:177...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDK4I= | ||
| + | |CDKN2= | ||
| + | |CMM2= | ||
| + | |INK4= | ||
| + | |INK4A= | ||
| + | |MLM= | ||
| + | |MTS-1= | ||
| + | |MTS1= | ||
| + | |P14= | ||
| + | |P14ARF= | ||
| + | |P16= | ||
| + | |P16-INK4A= | ||
| + | |P16INK4= | ||
| + | |P16INK4A= | ||
| + | |P19= | ||
| + | |P19ARF= | ||
| + | |TP16= | ||
|all_trans=ENST00000304494.9:-41 uc003zpk.4:-41 NM_000077:-76 NM_001195132:-76 KC814157:176 L27211:176 JQ694043:176 JQ694044:176 JQ694045:176 ENST00000498124.1:177 uc010miu.4:177 DQ318021:177 ENST00000579122.1:185 uc064skb.1:185 ENST00000380151.3:216 NM_058197:216 uc003zpj.4:216 AF115544:216 | |all_trans=ENST00000304494.9:-41 uc003zpk.4:-41 NM_000077:-76 NM_001195132:-76 KC814157:176 L27211:176 JQ694043:176 JQ694044:176 JQ694045:176 ENST00000498124.1:177 uc010miu.4:177 DQ318021:177 ENST00000579122.1:185 uc064skb.1:185 ENST00000380151.3:216 NM_058197:216 uc003zpj.4:216 AF115544:216 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 23: | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=21975057 | |end=21975057 | ||
| + | |end_of_center_position=21975050 | ||
|entrez_id=1029 | |entrez_id=1029 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=ARF | + | |gene_alias=ARF |
|gene_description=cyclin dependent kinase inhibitor 2A | |gene_description=cyclin dependent kinase inhibitor 2A | ||
|gene_id=1029 | |gene_id=1029 | ||
| Line 24: | Line 42: | ||
|species=human | |species=human | ||
|start=21975042 | |start=21975042 | ||
| + | |start_of_center_position=21975049 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000304494.9 uc003zpk.4 | |transcript_name=ENST00000304494.9 uc003zpk.4 | ||
Revision as of 05:35, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21975049 |
|---|---|
| End of the center position in the TSS region: | 21975050 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000304494.9 uc003zpk.4 |
|---|---|
| Distance: | -41 |
| Num_trans: | 18 |
| All_trans: | ENST00000304494.9:-41 uc003zpk.4:-41 NM_000077:-76 NM_001195132:-76 KC814157:176 L27211:176 JQ694043:176 JQ694044:176 JQ694045:176 ENST00000498124.1:177 uc010miu.4:177 DQ318021:177 ENST00000579122.1:185 uc064skb.1:185 ENST00000380151.3:216 NM_058197:216 uc003zpj.4:216 AF115544:216 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_000077 |
| Entrez ID: | 1029 |
| Nearest Unigene: | Hs.512599 |
| Nearest Refseq: | NM_000077 |
| Nearest Ensembl: | ENSG00000147889 |
| Gene Name: | cyclin-dependent kinase inhibitor 2A |
| Gene Alias: | ARF |
| Gene Description: | cyclin dependent kinase inhibitor 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
