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Difference between revisions of "TSS:Hg 96302.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000468603.6:71 uc064skl.1:71 ENST00000584351.5:84 ENST00000583719.5:84 ENST00000580467.5:84 ENST00000585267.5:84 ENST00000580576.5:84 ENST00000428...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|CDKN2B-AS=
 +
|CDKN2BAS=
 +
|NCRNA00089=
 +
|PCAT12=
 
|all_trans=ENST00000468603.6:71 uc064skl.1:71 ENST00000584351.5:84 ENST00000583719.5:84 ENST00000580467.5:84 ENST00000585267.5:84 ENST00000580576.5:84 ENST00000428597.5:84 NR_047543:84 NR_047542:84 NR_047541:84 NR_047540:84 NR_047539:84 NR_047538:84 NR_047537:84 NR_047536:84 NR_047535:84 NR_003529:84 NR_047533:84 NR_047534:84 NR_047532:84 NR_120536:84 uc022bed.1:84 uc022bef.1:84 uc010miw.1:84 uc022bel.2:84 uc022bek.2:84 uc003zpm.4:84 DQ485454:84 GQ422823:84 GQ495926:84 GQ495925:84 AB548314:84 DQ485453:84 ENST00000582301.5:195 ENST00000584816.5:195 ENST00000584020.5:195 ENST00000577551.5:195 ENST00000584637.5:195 ENST00000581051.5:195 ENST00000582072.5:195 uc022bee.2:195 uc022beg.2:195 uc022ben.2:195 uc022bem.2:195 uc022bei.2:195 uc022beh.2:195 uc022bej.2:195 GQ495924:195 GQ495918:195 GQ495919:195 GQ495920:195 GQ495921:195 GQ495922:195 GQ495923:195 ENST00000455933.6:388 uc010mix.2:388 EU741058:388
 
|all_trans=ENST00000468603.6:71 uc064skl.1:71 ENST00000584351.5:84 ENST00000583719.5:84 ENST00000580467.5:84 ENST00000585267.5:84 ENST00000580576.5:84 ENST00000428597.5:84 NR_047543:84 NR_047542:84 NR_047541:84 NR_047540:84 NR_047539:84 NR_047538:84 NR_047537:84 NR_047536:84 NR_047535:84 NR_003529:84 NR_047533:84 NR_047534:84 NR_047532:84 NR_120536:84 uc022bed.1:84 uc022bef.1:84 uc010miw.1:84 uc022bel.2:84 uc022bek.2:84 uc003zpm.4:84 DQ485454:84 GQ422823:84 GQ495926:84 GQ495925:84 AB548314:84 DQ485453:84 ENST00000582301.5:195 ENST00000584816.5:195 ENST00000584020.5:195 ENST00000577551.5:195 ENST00000584637.5:195 ENST00000581051.5:195 ENST00000582072.5:195 uc022bee.2:195 uc022beg.2:195 uc022ben.2:195 uc022bem.2:195 uc022bei.2:195 uc022beh.2:195 uc022bej.2:195 GQ495924:195 GQ495918:195 GQ495919:195 GQ495920:195 GQ495921:195 GQ495922:195 GQ495923:195 ENST00000455933.6:388 uc010mix.2:388 EU741058:388
 
|chr=chr9
 
|chr=chr9
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|distance_to_tss=-90
 
|distance_to_tss=-90
 
|end=21994707
 
|end=21994707
 +
|end_of_center_position=21994702
 
|entrez_id=100048912
 
|entrez_id=100048912
 
|gc_percent=0.761194
 
|gc_percent=0.761194
−
|gene_alias=ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS
+
|gene_alias=ANRIL
 
|gene_description=CDKN2B antisense RNA 1
 
|gene_description=CDKN2B antisense RNA 1
 
|gene_id=100048912
 
|gene_id=100048912
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|nearest_unigene=Hs.493614
 
|nearest_unigene=Hs.493614
 
|num_trans=58
 
|num_trans=58
 +
|p15AS=
 
|species=human
 
|species=human
 
|start=21994695
 
|start=21994695
 +
|start_of_center_position=21994701
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000468603.6 uc064skl.1
 
|transcript_name=ENST00000468603.6 uc064skl.1

Revision as of 05:36, 11 May 2019

Basic information about the TSS

TSS ID:hg_96302.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21994695
End:21994707
Strand:+
TSS Score:1
Start of the center position in the TSS region:21994701
End of the center position in the TSS region:21994702



Gene and protein annotation

Transcript_name:ENST00000468603.6 uc064skl.1
Distance:71
GeneID:100048912
HGNC/MGI_ID:HGNC:34341
UniProt_ID:
Gene_name:CDKN2B antisense RNA 1
Gene_symbol:CDKN2B-AS1
Gene_synonyms:ANRIL CDKN2B-AS CDKN2BAS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
Gene_source:HGNC:34341



Transcript annotation

Transcript_name:ENST00000468603.6 uc064skl.1
Distance:71
Num_trans:58
All_trans:ENST00000468603.6:71 uc064skl.1:71 ENST00000584351.5:84 ENST00000583719.5:84 ENST00000580467.5:84 ENST00000585267.5:84 ENST00000580576.5:84 ENST00000428597.5:84 NR_047543:84 NR_047542:84 NR_047541:84 NR_047540:84 NR_047539:84 NR_047538:84 NR_047537:84 NR_047536:84 NR_047535:84 NR_003529:84 NR_047533:84 NR_047534:84 NR_047532:84 NR_120536:84 uc022bed.1:84 uc022bef.1:84 uc010miw.1:84 uc022bel.2:84 uc022bek.2:84 uc003zpm.4:84 DQ485454:84 GQ422823:84 GQ495926:84 GQ495925:84 AB548314:84 DQ485453:84 ENST00000582301.5:195 ENST00000584816.5:195 ENST00000584020.5:195 ENST00000577551.5:195 ENST00000584637.5:195 ENST00000581051.5:195 ENST00000582072.5:195 uc022bee.2:195 uc022beg.2:195 uc022ben.2:195 uc022bem.2:195 uc022bei.2:195 uc022beh.2:195 uc022bej.2:195 GQ495924:195 GQ495918:195 GQ495919:195 GQ495920:195 GQ495921:195 GQ495922:195 GQ495923:195 ENST00000455933.6:388 uc010mix.2:388 EU741058:388



TATA-Box annotation

Distance to TSS:-90
Nearest PromoterID:NR_047532
Entrez ID:100048912
Nearest Unigene:Hs.493614
Nearest Refseq:NR_003529
Nearest Ensembl:ENSG00000240498
Gene Name:CDKN2B antisense RNA 1
Gene Alias:ANRIL
Gene Description:CDKN2B antisense RNA 1
Gene Type:ncRNA
CpG%:0.125
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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