Difference between revisions of "TSS:Hg 219733.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000223951.10:-87 NM_001171197:-87 uc003zps.4:-87 BC030692:-87 ENST00000380110.8:118 uc031tdf.2:118 BC035004:-427 NM_001171195:-452 BC042393:-452 E...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |HELN1= | ||
| + | |HUB= | ||
|all_trans=ENST00000223951.10:-87 NM_001171197:-87 uc003zps.4:-87 BC030692:-87 ENST00000380110.8:118 uc031tdf.2:118 BC035004:-427 NM_001171195:-452 BC042393:-452 ENST00000544538.5:-455 uc064sku.1:-455 | |all_trans=ENST00000223951.10:-87 NM_001171197:-87 uc003zps.4:-87 BC030692:-87 ENST00000380110.8:118 uc031tdf.2:118 BC035004:-427 NM_001171195:-452 BC042393:-452 ENST00000544538.5:-455 uc064sku.1:-455 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=87 | |distance_to_tss=87 | ||
|end=23821393 | |end=23821393 | ||
| + | |end_of_center_position=23821393 | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=HEL-N1 | + | |gene_alias=HEL-N1 |
|gene_description=ELAV like RNA binding protein 2 | |gene_description=ELAV like RNA binding protein 2 | ||
|gene_id=1993 | |gene_id=1993 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=23821392 | |start=23821392 | ||
| + | |start_of_center_position=23821392 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000223951.10 NM_001171197 uc003zps.4 BC030692 | |transcript_name=ENST00000223951.10 NM_001171197 uc003zps.4 BC030692 | ||
Revision as of 05:41, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23821392 |
|---|---|
| End of the center position in the TSS region: | 23821393 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000223951.10 NM_001171197 uc003zps.4 BC030692 |
|---|---|
| Distance: | -87 |
| Num_trans: | 11 |
| All_trans: | ENST00000223951.10:-87 NM_001171197:-87 uc003zps.4:-87 BC030692:-87 ENST00000380110.8:118 uc031tdf.2:118 BC035004:-427 NM_001171195:-452 BC042393:-452 ENST00000544538.5:-455 uc064sku.1:-455 |
TATA-Box annotation
| Distance to TSS: | 87 |
|---|---|
| Nearest PromoterID: | NM_001171197 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAV like neuron-specific RNA binding protein 2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
