Difference between revisions of "TSS:Hg 100298.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-174 | |distance_to_tss=-174 | ||
|end=23826246 | |end=23826246 | ||
| + | |end_of_center_position=23826239 | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=HEL-N1 | + | |gene_alias=HEL-N1 |
|gene_description=ELAV like RNA binding protein 2 | |gene_description=ELAV like RNA binding protein 2 | ||
|gene_name=ELAVL2 | |gene_name=ELAVL2 | ||
| Line 21: | Line 22: | ||
|species=human | |species=human | ||
|start=23826231 | |start=23826231 | ||
| + | |start_of_center_position=23826238 | ||
|strand=- | |strand=- | ||
|tata_box="-7(CCTTTTAAGACG,+,0.00)" | |tata_box="-7(CCTTTTAAGACG,+,0.00)" | ||
Revision as of 05:42, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23826238 |
|---|---|
| End of the center position in the TSS region: | 23826239 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U12431 U29943 |
|---|---|
| Distance: | -57 |
| Num_trans: | 10 |
| All_trans: | U12431:-57 U29943:-57 ENST00000462649.1:58 uc064skx.1:58 ENST00000380117.5:-91 uc003zpv.4:-91 ENST00000397312.6:167 NM_004432:167 uc003zpu.4:167 AB209294:167 |
TATA-Box annotation
| Distance to TSS: | -174 |
|---|---|
| Nearest PromoterID: | NM_004432 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAVL2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(CCTTTTAAGACG,+,0.00)" |
