Difference between revisions of "TSS:Hg 100317.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
|end=26892824 | |end=26892824 | ||
| + | |end_of_center_position=26892796 | ||
|entrez_id=79886 | |entrez_id=79886 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=C9orf82 | + | |gene_alias=C9orf82 |
|gene_description=caspase activity and apoptosis inhibitor 1 | |gene_description=caspase activity and apoptosis inhibitor 1 | ||
|gene_id=79886 | |gene_id=79886 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=26892767 | |start=26892767 | ||
| + | |start_of_center_position=26892795 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000333916.7 ENST00000520187.1 ENST00000483493.6 uc003zqc.4 uc064sln.1 uc064slo.1 BC014658 AK023719 | |transcript_name=ENST00000333916.7 ENST00000520187.1 ENST00000483493.6 uc003zqc.4 uc064sln.1 uc064slo.1 BC014658 AK023719 | ||
Revision as of 05:45, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26892795 |
|---|---|
| End of the center position in the TSS region: | 26892796 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000333916.7 ENST00000520187.1 ENST00000483493.6 uc003zqc.4 uc064sln.1 uc064slo.1 BC014658 AK023719 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000333916.7:0 ENST00000520187.1:0 ENST00000483493.6:0 uc003zqc.4:0 uc064sln.1:0 uc064slo.1:0 BC014658:0 AK023719:0 NM_001167575:-4 NM_024828:-4 BC071953:41 HQ447530:52 AB590748:52 CU687198:52 ENST00000495958.5:164 uc064slp.1:164 ENST00000625311.1:326 uc003zqb.4:326 AK300739:326 AK301673:396 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001167575 |
| Entrez ID: | 79886 |
| Nearest Unigene: | Hs.178357 |
| Nearest Refseq: | NM_024828 |
| Nearest Ensembl: | ENSG00000120159 |
| Gene Name: | caspase activity and apoptosis inhibitor 1 |
| Gene Alias: | C9orf82 |
| Gene Description: | caspase activity and apoptosis inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
