Difference between revisions of "TSS:Hg 100332.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
|end=27297142 | |end=27297142 | ||
| + | |end_of_center_position=27297136 | ||
|entrez_id=54586 | |entrez_id=54586 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=AFAF | + | |gene_alias=AFAF |
|gene_description=equatorin | |gene_description=equatorin | ||
|gene_id=54586 | |gene_id=54586 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=27297128 | |start=27297128 | ||
| + | |start_of_center_position=27297135 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000380032.7 ENST00000537675.5 ENST00000380031.2 NM_001161585 NM_020641 uc003zql.4 uc011lnq.3 uc003zqm.4 AJ278482 BC014307 | |transcript_name=ENST00000380032.7 ENST00000537675.5 ENST00000380031.2 NM_001161585 NM_020641 uc003zql.4 uc011lnq.3 uc003zqm.4 AJ278482 BC014307 | ||
Revision as of 05:48, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 27297135 |
|---|---|
| End of the center position in the TSS region: | 27297136 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000380032.7 ENST00000537675.5 ENST00000380031.2 NM_001161585 NM_020641 uc003zql.4 uc011lnq.3 uc003zqm.4 AJ278482 BC014307 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000380032.7:0 ENST00000537675.5:0 ENST00000380031.2:0 NM_001161585:0 NM_020641:0 uc003zql.4:0 uc011lnq.3:0 uc003zqm.4:0 AJ278482:0 BC014307:0 BC137351:20 BC137352:20 BC144602:20 KJ902669:74 ENST00000484994.1:389 uc064smi.1:389 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001161585 |
| Entrez ID: | 54586 |
| Nearest Unigene: | Hs.163070 |
| Nearest Refseq: | NM_020641 |
| Nearest Ensembl: | ENSG00000120160 |
| Gene Name: | equatorin |
| Gene Alias: | AFAF |
| Gene Description: | equatorin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
