Difference between revisions of "TSS:Hg 219737.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DENNL72= | ||
| + | |FTDALS= | ||
| + | |FTDALS1= | ||
|all_trans=JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358 | |all_trans=JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=27573805 | |end=27573805 | ||
| + | |end_of_center_position=27573805 | ||
|entrez_id=203228 | |entrez_id=203228 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=ALSFTD | + | |gene_alias=ALSFTD |
|gene_description=chromosome 9 open reading frame 72 | |gene_description=chromosome 9 open reading frame 72 | ||
|gene_id=203228 | |gene_id=203228 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=27573804 | |start=27573804 | ||
| + | |start_of_center_position=27573804 | ||
|strand=- | |strand=- | ||
|transcript_name=JN681271 AK057806 | |transcript_name=JN681271 AK057806 | ||
Revision as of 05:52, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 27573804 |
|---|---|
| End of the center position in the TSS region: | 27573805 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | JN681271 AK057806 |
|---|---|
| Distance: | -39 |
| Num_trans: | 20 |
| All_trans: | JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_145005 |
| Entrez ID: | 203228 |
| Nearest Unigene: | Hs.493639 |
| Nearest Refseq: | NM_018325 |
| Nearest Ensembl: | ENSG00000147894 |
| Gene Name: | chromosome 9 open reading frame 72 |
| Gene Alias: | ALSFTD |
| Gene Description: | chromosome 9 open reading frame 72 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
