Difference between revisions of "TSS:Hg 100388.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=99 | |distance_to_tss=99 | ||
|end=32526263 | |end=32526263 | ||
| + | |end_of_center_position=32526225 | ||
|entrez_id=23586 | |entrez_id=23586 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=RIG-I | + | |gene_alias=RIG-I |
|gene_description=DExD/H-box helicase 58 | |gene_description=DExD/H-box helicase 58 | ||
|gene_id=23586 | |gene_id=23586 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=32526186 | |start=32526186 | ||
| + | |start_of_center_position=32526224 | ||
|strand=- | |strand=- | ||
|tata_box="-4(CGGCTTTAAAGC,-,0.00)" | |tata_box="-4(CGGCTTTAAAGC,-,0.00)" | ||
Revision as of 05:57, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32526224 |
|---|---|
| End of the center position in the TSS region: | 32526225 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379868.5 uc064smz.1 BC070029 AK315040 AK301678 BX647917 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000379868.5:0 uc064smz.1:0 BC070029:0 AK315040:0 AK301678:0 BX647917:0 BC132786:-9 BC136610:-9 AB385150:20 ENST00000379883.2:-61 NM_014314:-61 uc003zra.4:-61 AF038963:-61 BC107731:-80 |
TATA-Box annotation
| Distance to TSS: | 99 |
|---|---|
| Nearest PromoterID: | NM_014314 |
| Entrez ID: | 23586 |
| Nearest Unigene: | Hs.190622 |
| Nearest Refseq: | NM_014314 |
| Nearest Ensembl: | ENSG00000107201 |
| Gene Name: | DEXD/H-box helicase 58 |
| Gene Alias: | RIG-I |
| Gene Description: | DExD/H-box helicase 58 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-4(CGGCTTTAAAGC,-,0.00)" |
