Difference between revisions of "TSS:Hg 100488.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-248 | |distance_to_tss=-248 | ||
|end=34049213 | |end=34049213 | ||
| + | |end_of_center_position=34049198 | ||
|entrez_id=55833 | |entrez_id=55833 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=34049181 | |start=34049181 | ||
| + | |start_of_center_position=34049197 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000360802.5 ENST00000539807.5 ENST00000412543.5 NM_018449 NM_001282529 uc003ztq.1 uc064sra.1 uc064srd.1 | |transcript_name=ENST00000360802.5 ENST00000539807.5 ENST00000412543.5 NM_018449 NM_001282529 uc003ztq.1 uc064sra.1 uc064srd.1 | ||
Revision as of 06:14, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 34049197 |
|---|---|
| End of the center position in the TSS region: | 34049198 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000360802.5 ENST00000539807.5 ENST00000412543.5 NM_018449 NM_001282529 uc003ztq.1 uc064sra.1 uc064srd.1 |
|---|---|
| Distance: | 233 |
| Num_trans: | 24 |
| All_trans: | ENST00000360802.5:233 ENST00000539807.5:233 ENST00000412543.5:233 NM_018449:233 NM_001282529:233 uc003ztq.1:233 uc064sra.1:233 uc064srd.1:233 AK302335:253 BC111409:280 ENST00000379238.5:281 uc064sqx.1:281 ENST00000629575.2:295 ENST00000459988.1:295 uc064sqz.1:295 uc064srg.1:295 AK303493:295 AK299183:295 AK294952:295 CR933678:295 AK302754:297 ENST00000480885.5:310 uc064srf.1:310 AB209911:310 |
TATA-Box annotation
| Distance to TSS: | -248 |
|---|---|
| Nearest PromoterID: | NM_018449 |
| Entrez ID: | 55833 |
| Nearest Unigene: | Hs.493739 |
| Nearest Refseq: | NM_018449 |
| Nearest Ensembl: | ENSG00000137073 |
| Gene Name: | ubiquitin associated protein 2 |
| Gene Alias: | UBAP-2 |
| Gene Description: | ubiquitin associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
