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Difference between revisions of "TSS:Hg 100510.1"

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Line 9: Line 9:
 
|distance_to_tss=42
 
|distance_to_tss=42
 
|end=34397815
 
|end=34397815
 +
|end_of_center_position=34397809
 
|entrez_id=84688
 
|entrez_id=84688
 
|gc_percent=0.60199
 
|gc_percent=0.60199
|gene_alias=CBE1|NYD-SP22|SMRP1|bA573M23.4
+
|gene_alias=CBE1
 
|gene_description=chromosome 9 open reading frame 24
 
|gene_description=chromosome 9 open reading frame 24
 
|gene_id=84688
 
|gene_id=84688
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=34397802
 
|start=34397802
 +
|start_of_center_position=34397808
 
|strand=-
 
|strand=-
 
|transcript_name=BC022084
 
|transcript_name=BC022084

Revision as of 06:18, 11 May 2019

Basic information about the TSS


TSS ID:hg_100510.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34397802
End:34397815
Strand:-
TSS Score:1
Start of the center position in the TSS region:34397808
End of the center position in the TSS region:34397809



Gene and protein annotation


Transcript_name:BC022084
Distance:-14
GeneID:84688
HGNC/MGI_ID:HGNC:19919
UniProt_ID:
Gene_name:chromosome 9 open reading frame 24
Gene_symbol:C9orf24
Gene_synonyms:CBE1 MGC32921 MGC33614 NYD-SP22 SMRP1 bA573M23.4
Gene_source:HGNC:19919



Transcript annotation


Transcript_name:BC022084
Distance:-14
Num_trans:12
All_trans:BC022084:-14 AK058087:14 ENST00000297623.6:-17 uc003zuh.3:-17 NM_032596:-36 BC029484:-36 HQ447092:169 KJ895021:169 KJ899823:169 CU688666:169 ENST00000444429.1:274 uc064srx.1:274



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NM_032596
Entrez ID:84688
Nearest Unigene:Hs.50334
Nearest Refseq:NM_032596
Nearest Ensembl:ENSG00000164972
Gene Name:chromosome 9 open reading frame 24
Gene Alias:CBE1
Gene Description:chromosome 9 open reading frame 24
Gene Type:protein-coding
CpG%:0
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):