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Difference between revisions of "TSS:Hg 100513.1"

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Line 6: Line 6:
 
|distance_to_tss=47
 
|distance_to_tss=47
 
|end=34458526
 
|end=34458526
 +
|end_of_center_position=34458523
 
|entrez_id=203259
 
|entrez_id=203259
 
|gc_percent=0.666667
 
|gc_percent=0.666667
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=34458519
 
|start=34458519
 +
|start_of_center_position=34458522
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000422409.5 ENST00000379078.1 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc064sse.1 uc064ssf.1
 
|transcript_name=ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000422409.5 ENST00000379078.1 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc064sse.1 uc064ssf.1

Revision as of 06:18, 11 May 2019

Basic information about the TSS

TSS ID:hg_100513.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34458519
End:34458526
Strand:-
TSS Score:1
Start of the center position in the TSS region:34458522
End of the center position in the TSS region:34458523



Gene and protein annotation

Transcript_name:ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000422409.5 ENST00000379078.1 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc064sse.1 uc064ssf.1
Distance:-26
GeneID:203259
HGNC/MGI_ID:HGNC:19920
UniProt_ID:A0A0A0MRV9 A0A0A0MRW0 A0A0A0MRW1 A0A0A0MRW2 A0A0A0MRW3 Q5T586 Q5T593
Gene_name:family with sequence similarity 219 member A
Gene_symbol:FAM219A
Gene_synonyms:FLJ39031 bA573M23.5
Gene_source:HGNC:19920



Transcript annotation

Transcript_name:ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000422409.5 ENST00000379078.1 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc064sse.1 uc064ssf.1
Distance:-26
Num_trans:30
All_trans:ENST00000379089.5:-26 ENST00000379087.5:-26 ENST00000379084.5:-26 ENST00000379081.5:-26 ENST00000379080.5:-26 ENST00000422409.5:-26 ENST00000379078.1:-26 uc064srz.1:-26 uc064ssa.1:-26 uc064ssb.1:-26 uc064ssc.1:-26 uc064ssd.1:-26 uc064sse.1:-26 uc064ssf.1:-26 AK299882:-39 ENST00000445726.5:-44 ENST00000297620.8:-44 NM_001184945:-44 NM_001184943:-44 NM_147202:-44 NM_001184942:-44 NM_001184941:-44 NM_001184940:-44 uc011lok.3:-44 uc003zuj.4:-44 AK123887:-44 BC041009:-44 AK096350:-44 AK294054:-44 KJ895817:256



TATA-Box annotation

Distance to TSS:47
Nearest PromoterID:NM_147202
Entrez ID:203259
Nearest Unigene:Hs.493771
Nearest Refseq:NM_147202
Nearest Ensembl:ENSG00000164970
Gene Name:family with sequence similarity 219 member A
Gene Alias:C9orf25
Gene Description:family with sequence similarity 219 member A
Gene Type:protein-coding
CpG%:0.095
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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