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Difference between revisions of "TSS:Hg 13969.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000339438.10:0 ENST00000261443.9:0 ENST00000534699.5:0 ENST00000529046.5:0 ENST00000525970.5:0 ENST00000533818.5:0 ENST00000524652.1:0 uc001efl.4:...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|UNR=
 
|all_trans=ENST00000339438.10:0 ENST00000261443.9:0 ENST00000534699.5:0 ENST00000529046.5:0 ENST00000525970.5:0 ENST00000533818.5:0 ENST00000524652.1:0 uc001efl.4:0 uc001efn.4:0 uc009wgv.4:0 uc057jqf.1:0 uc057jqj.1:0 uc057jqk.1:0 uc057jql.1:0 CR749431:0 BX648780:0 BC017662:0 AK290146:0 BC032446:0 ENST00000525132.1:3 uc057jqg.1:3 ENST00000369530.5:-4 uc001efm.4:-4 ENST00000358528.8:8 uc001efk.4:8 AB020692:8 AF077054:15 AK022516:20 AK022528:20 ENST00000530886.5:-28 uc057jqa.1:-28 ENST00000610726.4:-51 NM_001242892:-51 NM_001130523:-51 NM_007158:-51 NM_001242893:-51 NM_001242891:-51 NM_001007553:-51 uc001efi.4:-51
 
|all_trans=ENST00000339438.10:0 ENST00000261443.9:0 ENST00000534699.5:0 ENST00000529046.5:0 ENST00000525970.5:0 ENST00000533818.5:0 ENST00000524652.1:0 uc001efl.4:0 uc001efn.4:0 uc009wgv.4:0 uc057jqf.1:0 uc057jqj.1:0 uc057jqk.1:0 uc057jql.1:0 CR749431:0 BX648780:0 BC017662:0 AK290146:0 BC032446:0 ENST00000525132.1:3 uc057jqg.1:3 ENST00000369530.5:-4 uc001efm.4:-4 ENST00000358528.8:8 uc001efk.4:8 AB020692:8 AF077054:15 AK022516:20 AK022528:20 ENST00000530886.5:-28 uc057jqa.1:-28 ENST00000610726.4:-51 NM_001242892:-51 NM_001130523:-51 NM_007158:-51 NM_001242893:-51 NM_001242891:-51 NM_001007553:-51 uc001efi.4:-51
 
|chr=chr1
 
|chr=chr1
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|distance_to_tss=65
 
|distance_to_tss=65
 
|end=114757999
 
|end=114757999
 +
|end_of_center_position=114757986
 
|entrez_id=7812
 
|entrez_id=7812
 
|gc_percent=0.626866
 
|gc_percent=0.626866
−
|gene_alias=D1S155E|UNR
+
|gene_alias=D1S155E
 
|gene_description=cold shock domain containing E1
 
|gene_description=cold shock domain containing E1
 
|gene_id=7812
 
|gene_id=7812
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|species=human
 
|species=human
 
|start=114757971
 
|start=114757971
 +
|start_of_center_position=114757985
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000339438.10 ENST00000261443.9 ENST00000534699.5 ENST00000529046.5 ENST00000525970.5 ENST00000533818.5 ENST00000524652.1 uc001efl.4 uc001efn.4 uc009wgv.4 uc057jqf.1 uc057jqj.1 uc057jqk.1 uc057jql.1 CR749431 BX648780 BC017662 AK290146 BC032446
 
|transcript_name=ENST00000339438.10 ENST00000261443.9 ENST00000534699.5 ENST00000529046.5 ENST00000525970.5 ENST00000533818.5 ENST00000524652.1 uc001efl.4 uc001efn.4 uc009wgv.4 uc057jqf.1 uc057jqj.1 uc057jqk.1 uc057jql.1 CR749431 BX648780 BC017662 AK290146 BC032446

Revision as of 06:29, 11 May 2019

Basic information about the TSS

TSS ID:hg_13969.1
Species:human
Chr:chr1
TSS Classification:yes
Start:114757971
End:114757999
Strand:-
TSS Score:1
Start of the center position in the TSS region:114757985
End of the center position in the TSS region:114757986



Gene and protein annotation

Transcript_name:ENST00000339438.10 ENST00000261443.9 ENST00000534699.5 ENST00000529046.5 ENST00000525970.5 ENST00000533818.5 ENST00000524652.1 uc001efl.4 uc001efn.4 uc009wgv.4 uc057jqf.1 uc057jqj.1 uc057jqk.1 uc057jql.1 CR749431 BX648780 BC017662 AK290146 BC032446
Distance:0
GeneID:7812
HGNC/MGI_ID:HGNC:29905
UniProt_ID:A0A024R0E2 A0A024R0K2 E9PNG3 O75534
Gene_name:cold shock domain containing E1
Gene_symbol:CSDE1
Gene_synonyms:D1S155E UNR
Gene_source:HGNC:29905



Transcript annotation

Transcript_name:ENST00000339438.10 ENST00000261443.9 ENST00000534699.5 ENST00000529046.5 ENST00000525970.5 ENST00000533818.5 ENST00000524652.1 uc001efl.4 uc001efn.4 uc009wgv.4 uc057jqf.1 uc057jqj.1 uc057jqk.1 uc057jql.1 CR749431 BX648780 BC017662 AK290146 BC032446
Distance:0
Num_trans:39
All_trans:ENST00000339438.10:0 ENST00000261443.9:0 ENST00000534699.5:0 ENST00000529046.5:0 ENST00000525970.5:0 ENST00000533818.5:0 ENST00000524652.1:0 uc001efl.4:0 uc001efn.4:0 uc009wgv.4:0 uc057jqf.1:0 uc057jqj.1:0 uc057jqk.1:0 uc057jql.1:0 CR749431:0 BX648780:0 BC017662:0 AK290146:0 BC032446:0 ENST00000525132.1:3 uc057jqg.1:3 ENST00000369530.5:-4 uc001efm.4:-4 ENST00000358528.8:8 uc001efk.4:8 AB020692:8 AF077054:15 AK022516:20 AK022528:20 ENST00000530886.5:-28 uc057jqa.1:-28 ENST00000610726.4:-51 NM_001242892:-51 NM_001130523:-51 NM_007158:-51 NM_001242893:-51 NM_001242891:-51 NM_001007553:-51 uc001efi.4:-51



TATA-Box annotation

Distance to TSS:65
Nearest PromoterID:NM_001242892
Entrez ID:7812
Nearest Unigene:Hs.69855
Nearest Refseq:NM_007158
Nearest Ensembl:ENSG00000009307
Gene Name:cold shock domain containing E1
Gene Alias:D1S155E
Gene Description:cold shock domain containing E1
Gene Type:protein-coding
CpG%:0.095
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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