Difference between revisions of "TSS:Hg 100782.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=125 | |distance_to_tss=125 | ||
|end=39810037 | |end=39810037 | ||
| + | |end_of_center_position=39810034 | ||
|entrez_id=389741 | |entrez_id=389741 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=LINC01172 | + | |gene_alias=LINC01172 |
|gene_description=glioblastoma down-regulated RNA | |gene_description=glioblastoma down-regulated RNA | ||
|gene_id=389741 | |gene_id=389741 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=39810030 | |start=39810030 | ||
| + | |start_of_center_position=39810033 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000627065.1 uc010mms.5 BC000869 | |transcript_name=ENST00000627065.1 uc010mms.5 BC000869 | ||
Revision as of 07:11, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 39810033 |
|---|---|
| End of the center position in the TSS region: | 39810034 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000627065.1 uc010mms.5 BC000869 |
|---|---|
| Distance: | 18 |
| Num_trans: | 16 |
| All_trans: | ENST00000627065.1:18 uc010mms.5:18 BC000869:18 ENST00000618092.2:-21 uc010mmr.3:-21 AK092305:-21 AK095690:-22 ENST00000625350.1:-26 uc033cri.2:-26 BC027338:-26 NR_126046:-122 NR_015363:-122 NR_126045:-122 NR_126044:-122 KJ904265:176 BC019880:361 |
TATA-Box annotation
| Distance to TSS: | 125 |
|---|---|
| Nearest PromoterID: | NR_126044 |
| Entrez ID: | 389741 |
| Nearest Unigene: | Hs.380240 |
| Nearest Refseq: | NM_203448 |
| Nearest Ensembl: | ENSG00000278175 |
| Gene Name: | glioblastoma down-regulated RNA |
| Gene Alias: | LINC01172 |
| Gene Description: | glioblastoma down-regulated RNA |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
