Difference between revisions of "TSS:Hg 100796.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
|end=68540884 | |end=68540884 | ||
| + | |end_of_center_position=68540882 | ||
|entrez_id=169693 | |entrez_id=169693 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=68540879 | |start=68540879 | ||
| + | |start_of_center_position=68540881 | ||
|strand=- | |strand=- | ||
|tata_box="-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00)" | |tata_box="-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00)" | ||
Revision as of 07:19, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68540881 |
|---|---|
| End of the center position in the TSS region: | 68540882 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377311.3 NM_153237 uc004agt.4 BC029780 |
|---|---|
| Distance: | 13 |
| Num_trans: | 7 |
| All_trans: | ENST00000377311.3:13 NM_153237:13 uc004agt.4:13 BC029780:13 KJ895755:66 DQ890797:66 DQ893952:66 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_153237 |
| Entrez ID: | 169693 |
| Nearest Unigene: | Hs.663056 |
| Nearest Refseq: | NM_153237 |
| Nearest Ensembl: | ENSG00000181778 |
| Gene Name: | transmembrane protein 252 |
| Gene Alias: | C9orf71 |
| Gene Description: | transmembrane protein 252 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00)" |
