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Difference between revisions of "TSS:Mm 10032.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000110849.9:0 ENSMUST00000073279.12:0 ENSMUST00000192158.5:0 ENSMUST00000192491.5:0 ENSMUST00000194493.1:0 ENSMUST00000194395.5:0 ENSMUST000001...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|C730034D20Rik=
 +
|E130101E15Rik=
 
|all_trans=ENSMUST00000110849.9:0 ENSMUST00000073279.12:0 ENSMUST00000192158.5:0 ENSMUST00000192491.5:0 ENSMUST00000194493.1:0 ENSMUST00000194395.5:0 ENSMUST00000193322.1:0 NM_144814:0 NM_001290282:0 NM_001290278:0 NM_001290279:0 NM_001290280:0 uc007edi.2:0 uc007edj.2:0 uc007edh.2:0 uc007edk.2:0 uc007edl.2:0 uc056yfu.1:0 AK135612:0 AK155440:0 AK050287:0 AK040839:0 AK164939:0 ENSMUST00000192866.5:-15 ENSMUST00000192128.5:72 BC020065:72 BC057141:212 AK203210:232 BC138938:239 BC138939:239 BC145469:239 ENSMUST00000193144.1:339
 
|all_trans=ENSMUST00000110849.9:0 ENSMUST00000073279.12:0 ENSMUST00000192158.5:0 ENSMUST00000192491.5:0 ENSMUST00000194493.1:0 ENSMUST00000194395.5:0 ENSMUST00000193322.1:0 NM_144814:0 NM_001290282:0 NM_001290278:0 NM_001290279:0 NM_001290280:0 uc007edi.2:0 uc007edj.2:0 uc007edh.2:0 uc007edk.2:0 uc007edl.2:0 uc056yfu.1:0 AK135612:0 AK155440:0 AK050287:0 AK040839:0 AK164939:0 ENSMUST00000192866.5:-15 ENSMUST00000192128.5:72 BC020065:72 BC057141:212 AK203210:232 BC138938:239 BC138939:239 BC145469:239 ENSMUST00000193144.1:339
 
|chr=chr1
 
|chr=chr1
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|distance_to_tss=17
 
|distance_to_tss=17
 
|end=192138047
 
|end=192138047
 +
|end_of_center_position=192138023
 
|entrez_id=214742
 
|entrez_id=214742
 
|gc_percent=0.79602
 
|gc_percent=0.79602
−
|gene_alias=4921514E24Rik|C730034D20Rik|E130101E15Rik
+
|gene_alias=4921514E24Rik
 
|gene_description=REST corepressor 3
 
|gene_description=REST corepressor 3
 
|gene_id=214742
 
|gene_id=214742
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|species=mouse
 
|species=mouse
 
|start=192137998
 
|start=192137998
 +
|start_of_center_position=192138022
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 NM_144814 NM_001290282 NM_001290278 NM_001290279 NM_001290280 uc007edi.2 uc007edj.2 uc007edh.2 uc007edk.2 uc007edl.2 uc056yfu.1 AK135612 AK155440 AK050287 AK040839 AK164939
 
|transcript_name=ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 NM_144814 NM_001290282 NM_001290278 NM_001290279 NM_001290280 uc007edi.2 uc007edj.2 uc007edh.2 uc007edk.2 uc007edl.2 uc056yfu.1 AK135612 AK155440 AK050287 AK040839 AK164939

Revision as of 07:31, 11 May 2019

Basic information about the TSS

TSS ID:mm_10032.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192137998
End:192138047
Strand:-
TSS Score:1
Start of the center position in the TSS region:192138022
End of the center position in the TSS region:192138023



Gene and protein annotation

Transcript_name:ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 NM_144814 NM_001290282 NM_001290278 NM_001290279 NM_001290280 uc007edi.2 uc007edj.2 uc007edh.2 uc007edk.2 uc007edl.2 uc056yfu.1 AK135612 AK155440 AK050287 AK040839 AK164939
Distance:0
GeneID:214742
HGNC/MGI_ID:MGI:2441920
UniProt_ID:A0A0A6YWP7 A0A0A6YWY4 A0A0A6YX54 Q6PGA0 Q6PGA0-2
Gene_name:REST corepressor 3
Gene_symbol:Rcor3
Gene_synonyms:4921514E24Rik C730034D20Rik E130101E15Rik
Gene_source:MGI:2441920



Transcript annotation

Transcript_name:ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 NM_144814 NM_001290282 NM_001290278 NM_001290279 NM_001290280 uc007edi.2 uc007edj.2 uc007edh.2 uc007edk.2 uc007edl.2 uc056yfu.1 AK135612 AK155440 AK050287 AK040839 AK164939
Distance:0
Num_trans:32
All_trans:ENSMUST00000110849.9:0 ENSMUST00000073279.12:0 ENSMUST00000192158.5:0 ENSMUST00000192491.5:0 ENSMUST00000194493.1:0 ENSMUST00000194395.5:0 ENSMUST00000193322.1:0 NM_144814:0 NM_001290282:0 NM_001290278:0 NM_001290279:0 NM_001290280:0 uc007edi.2:0 uc007edj.2:0 uc007edh.2:0 uc007edk.2:0 uc007edl.2:0 uc056yfu.1:0 AK135612:0 AK155440:0 AK050287:0 AK040839:0 AK164939:0 ENSMUST00000192866.5:-15 ENSMUST00000192128.5:72 BC020065:72 BC057141:212 AK203210:232 BC138938:239 BC138939:239 BC145469:239 ENSMUST00000193144.1:339



TATA-Box annotation

Distance to TSS:17
Nearest PromoterID:NM_001290278
Entrez ID:214742
Nearest Unigene:Mm.207457
Nearest Refseq:NM_144814
Nearest Ensembl:ENSMUSG00000037395
Gene Name:REST corepressor 3
Gene Alias:4921514E24Rik
Gene Description:REST corepressor 3
Gene Type:protein-coding
CpG%:0.145
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
Retrieved from "http://reftss.riken.jp/reftss-v3/index.php?title=TSS:Mm_10032.1&oldid=736340"