Difference between revisions of "TSS:Mm 10039.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC060251:3 NM_198247:-16 uc007eds.2:-16 ENSMUST00000155579.7:-20 ENSMUST00000125391.1:238 |chr=chr1 |cpg_percent=0.14 |distance=3 |distance_to_tss=22 |e...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C130018M11Rik= | ||
|all_trans=BC060251:3 NM_198247:-16 uc007eds.2:-16 ENSMUST00000155579.7:-20 ENSMUST00000125391.1:238 | |all_trans=BC060251:3 NM_198247:-16 uc007eds.2:-16 ENSMUST00000155579.7:-20 ENSMUST00000125391.1:238 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
|end=192855736 | |end=192855736 | ||
| + | |end_of_center_position=192855730 | ||
|entrez_id=214791 | |entrez_id=214791 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=4833404A09 | + | |gene_alias=4833404A09 |
|gene_description=SERTA domain containing 4 | |gene_description=SERTA domain containing 4 | ||
|gene_id=214791 | |gene_id=214791 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=192855723 | |start=192855723 | ||
| + | |start_of_center_position=192855729 | ||
|strand=- | |strand=- | ||
|transcript_name=BC060251 | |transcript_name=BC060251 | ||
Revision as of 07:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 192855729 |
|---|---|
| End of the center position in the TSS region: | 192855730 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC060251 |
|---|---|
| Distance: | 3 |
| Num_trans: | 5 |
| All_trans: | BC060251:3 NM_198247:-16 uc007eds.2:-16 ENSMUST00000155579.7:-20 ENSMUST00000125391.1:238 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_198247 |
| Entrez ID: | 214791 |
| Nearest Unigene: | Mm.22806 |
| Nearest Refseq: | NM_198247 |
| Nearest Ensembl: | ENSMUSG00000016262 |
| Gene Name: | SERTA domain containing 4 |
| Gene Alias: | 4833404A09 |
| Gene Description: | SERTA domain containing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
