Difference between revisions of "TSS:Mm 10043.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000195354.5:0 NM_181546:0 NM_001301370:0 uc011wyy.2:0 uc007edu.2:0 uc007edv.2:0 AK045901:0 ENSMUST00000016344.8:40 BC141262:40 BC145602:40 AB10...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-18 | |distance_to_tss=-18 | ||
|end=193035830 | |end=193035830 | ||
| + | |end_of_center_position=193035794 | ||
|entrez_id=329324 | |entrez_id=329324 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=B230320I09Rik | + | |gene_alias=B230320I09Rik |
|gene_description=synaptotagmin XIV | |gene_description=synaptotagmin XIV | ||
|gene_id=329324 | |gene_id=329324 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=193035756 | |start=193035756 | ||
| + | |start_of_center_position=193035793 | ||
|strand=- | |strand=- | ||
| + | |sytXIV= | ||
|transcript_name=ENSMUST00000195354.5 NM_181546 NM_001301370 uc011wyy.2 uc007edu.2 uc007edv.2 AK045901 | |transcript_name=ENSMUST00000195354.5 NM_181546 NM_001301370 uc011wyy.2 uc007edu.2 uc007edv.2 AK045901 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 07:33, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 193035793 |
|---|---|
| End of the center position in the TSS region: | 193035794 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000195354.5 NM_181546 NM_001301370 uc011wyy.2 uc007edu.2 uc007edv.2 AK045901 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000195354.5:0 NM_181546:0 NM_001301370:0 uc011wyy.2:0 uc007edu.2:0 uc007edv.2:0 AK045901:0 ENSMUST00000016344.8:40 BC141262:40 BC145602:40 AB102947:59 ENSMUST00000195530.5:95 ENSMUST00000191907.1:113 AK051175:113 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_181546 |
| Entrez ID: | 329324 |
| Nearest Unigene: | Mm.76710 |
| Nearest Refseq: | NM_181546 |
| Nearest Ensembl: | ENSMUSG00000016200 |
| Gene Name: | synaptotagmin XIV |
| Gene Alias: | B230320I09Rik |
| Gene Description: | synaptotagmin XIV |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
