Difference between revisions of "TSS:Mm 10045.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |AW045375= | ||
| + | |Def= | ||
|all_trans=ENSMUST00000085555.6:-1 NM_145415:8 uc007edw.1:8 uc011wyz.1:8 AK052355:8 ENSMUST00000195291.5:15 AK147251:15 AK088756:15 ENSMUST00000195848.1:52 BC019218:65 | |all_trans=ENSMUST00000085555.6:-1 NM_145415:8 uc007edw.1:8 uc011wyz.1:8 AK052355:8 ENSMUST00000195291.5:15 AK147251:15 AK088756:15 ENSMUST00000195848.1:52 BC019218:65 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
|end=193130271 | |end=193130271 | ||
| + | |end_of_center_position=193130265 | ||
|entrez_id=215193 | |entrez_id=215193 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=AA408296 | + | |gene_alias=AA408296 |
|gene_description=digestive organ expansion factor homolog (zebrafish) | |gene_description=digestive organ expansion factor homolog (zebrafish) | ||
|gene_id=215193 | |gene_id=215193 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=193130258 | |start=193130258 | ||
| + | |start_of_center_position=193130264 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000085555.6 | |transcript_name=ENSMUST00000085555.6 | ||
Revision as of 07:33, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 193130264 |
|---|---|
| End of the center position in the TSS region: | 193130265 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000085555.6 |
|---|---|
| Distance: | -1 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000085555.6:-1 NM_145415:8 uc007edw.1:8 uc011wyz.1:8 AK052355:8 ENSMUST00000195291.5:15 AK147251:15 AK088756:15 ENSMUST00000195848.1:52 BC019218:65 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_145415 |
| Entrez ID: | 215193 |
| Nearest Unigene: | Mm.173758 |
| Nearest Refseq: | NM_145415 |
| Nearest Ensembl: | ENSMUSG00000016181 |
| Gene Name: | digestive organ expansion factor homolog (zebrafish) |
| Gene Alias: | AA408296 |
| Gene Description: | digestive organ expansion factor homolog (zebrafish) |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
