Difference between revisions of "TSS:Mm 10050.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI115021= | ||
| + | |T3jam= | ||
|all_trans=AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137:-388 uc007eec.2:-388 AK041994:-388 ENSMUST00000194278.5:-389 ENSMUST00000043550.10:-389 | |all_trans=AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137:-388 uc007eec.2:-388 AK041994:-388 ENSMUST00000194278.5:-389 ENSMUST00000043550.10:-389 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=398 | |distance_to_tss=398 | ||
|end=193201158 | |end=193201158 | ||
| + | |end_of_center_position=193201148 | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=193201137 | |start=193201137 | ||
| + | |start_of_center_position=193201147 | ||
|strand=- | |strand=- | ||
|transcript_name=AK036608 | |transcript_name=AK036608 | ||
Revision as of 07:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 193201147 |
|---|---|
| End of the center position in the TSS region: | 193201148 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK036608 |
|---|---|
| Distance: | -157 |
| Num_trans: | 15 |
| All_trans: | AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137:-388 uc007eec.2:-388 AK041994:-388 ENSMUST00000194278.5:-389 ENSMUST00000043550.10:-389 |
TATA-Box annotation
| Distance to TSS: | 398 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
