Difference between revisions of "TSS:Mm 10051.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000161403.7:-38 BC096403:-38 BC036561:41 ENSMUST00000192020.5:61 AK031400:-67 AK036608:80 ENSMUST00000161145.7:-81 ENSMUST00000161151.2:-85 AK0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI115021= | ||
| + | |T3jam= | ||
|all_trans=ENSMUST00000161403.7:-38 BC096403:-38 BC036561:41 ENSMUST00000192020.5:61 AK031400:-67 AK036608:80 ENSMUST00000161145.7:-81 ENSMUST00000161151.2:-85 AK080080:-96 ENSMUST00000159805.7:-99 NM_153137:-129 uc007eec.2:-129 AK041994:-129 ENSMUST00000194278.5:-130 ENSMUST00000043550.10:-130 ENSMUST00000162905.1:-286 | |all_trans=ENSMUST00000161403.7:-38 BC096403:-38 BC036561:41 ENSMUST00000192020.5:61 AK031400:-67 AK036608:80 ENSMUST00000161145.7:-81 ENSMUST00000161151.2:-85 AK080080:-96 ENSMUST00000159805.7:-99 NM_153137:-129 uc007eec.2:-129 AK041994:-129 ENSMUST00000194278.5:-130 ENSMUST00000043550.10:-130 ENSMUST00000162905.1:-286 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=140 | |distance_to_tss=140 | ||
|end=193201417 | |end=193201417 | ||
| + | |end_of_center_position=193201406 | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=193201394 | |start=193201394 | ||
| + | |start_of_center_position=193201405 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000161403.7 BC096403 | |transcript_name=ENSMUST00000161403.7 BC096403 | ||
Revision as of 07:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 193201405 |
|---|---|
| End of the center position in the TSS region: | 193201406 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000161403.7 BC096403 |
|---|---|
| Distance: | -38 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000161403.7:-38 BC096403:-38 BC036561:41 ENSMUST00000192020.5:61 AK031400:-67 AK036608:80 ENSMUST00000161145.7:-81 ENSMUST00000161151.2:-85 AK080080:-96 ENSMUST00000159805.7:-99 NM_153137:-129 uc007eec.2:-129 AK041994:-129 ENSMUST00000194278.5:-130 ENSMUST00000043550.10:-130 ENSMUST00000162905.1:-286 |
TATA-Box annotation
| Distance to TSS: | 140 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
