Difference between revisions of "TSS:Mm 10064.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180420.2:-140 uc007eem.1:222 AK014513:222 |chr=chr1 |cpg_percent=0.01 |distance=-140 |distance_to_tss=-2499 |end=193510034 |entrez_id=387201...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-2499 | |distance_to_tss=-2499 | ||
|end=193510034 | |end=193510034 | ||
| + | |end_of_center_position=193510030 | ||
|entrez_id=387201 | |entrez_id=387201 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=Mirn205 | + | |gene_alias=Mirn205 |
|gene_description=microRNA 205 | |gene_description=microRNA 205 | ||
|gene_id= | |gene_id= | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:1918050 | |hgnc_mgi_id=MGI:1918050 | ||
| + | |mir-205= | ||
| + | |mmu-mir-205= | ||
|nearest_ensembl=ENSMUSG00000065533 | |nearest_ensembl=ENSMUSG00000065533 | ||
|nearest_promoter_id=NR_029592 | |nearest_promoter_id=NR_029592 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=193510024 | |start=193510024 | ||
| + | |start_of_center_position=193510029 | ||
|strand=- | |strand=- | ||
|tata_box="30(CCCTATAGAGCA,+,0.00)" | |tata_box="30(CCCTATAGAGCA,+,0.00)" | ||
Revision as of 07:36, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 193510029 |
|---|---|
| End of the center position in the TSS region: | 193510030 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000180420.2 |
|---|---|
| Distance: | -140 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000180420.2:-140 uc007eem.1:222 AK014513:222 |
TATA-Box annotation
| Distance to TSS: | -2499 |
|---|---|
| Nearest PromoterID: | NR_029592 |
| Entrez ID: | 387201 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029592 |
| Nearest Ensembl: | ENSMUSG00000065533 |
| Gene Name: | RIKEN cDNA 4631405K08 gene |
| Gene Alias: | Mirn205 |
| Gene Description: | microRNA 205 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "30(CCCTATAGAGCA,+,0.00)" |
