Difference between revisions of "TSS:Mm 10070.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK032775:0 |chr=chr1 |cpg_percent=0.035 |distance=0 |distance_to_tss=1044 |end=194620881 |entrez_id=18845 |gc_percent=0.58209 |gene_alias=2810428A13Rik|...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA589422= | ||
| + | |AW457381= | ||
| + | |OCT= | ||
| + | |PlexA2= | ||
| + | |Plxn2= | ||
|all_trans=AK032775:0 | |all_trans=AK032775:0 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=1044 | |distance_to_tss=1044 | ||
|end=194620881 | |end=194620881 | ||
| + | |end_of_center_position=194620873 | ||
|entrez_id=18845 | |entrez_id=18845 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=2810428A13Rik | + | |gene_alias=2810428A13Rik |
|gene_description=plexin A2 | |gene_description=plexin A2 | ||
|gene_id=623172 | |gene_id=623172 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3648997 | |hgnc_mgi_id=MGI:3648997 | ||
| + | |mKIAA0463= | ||
|nearest_ensembl=ENSMUSG00000026640 | |nearest_ensembl=ENSMUSG00000026640 | ||
|nearest_promoter_id=NM_008882 | |nearest_promoter_id=NM_008882 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=194620864 | |start=194620864 | ||
| + | |start_of_center_position=194620872 | ||
|strand=- | |strand=- | ||
|transcript_name=AK032775 | |transcript_name=AK032775 | ||
Revision as of 07:37, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 194620872 |
|---|---|
| End of the center position in the TSS region: | 194620873 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK032775 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK032775:0 |
TATA-Box annotation
| Distance to TSS: | 1044 |
|---|---|
| Nearest PromoterID: | NM_008882 |
| Entrez ID: | 18845 |
| Nearest Unigene: | Mm.2251 |
| Nearest Refseq: | NM_008882 |
| Nearest Ensembl: | ENSMUSG00000026640 |
| Gene Name: | predicted gene 6403 |
| Gene Alias: | 2810428A13Rik |
| Gene Description: | plexin A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
